Factsheet for Os01t0723400-04

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 15069638

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G285900.2	Wheat	cytosol	82.58	89.39
KXG33287	Sorghum	cytosol	81.49	88.36
TraesCS3B01G320200.1	Wheat	cytosol, peroxisome, plastid	85.07	85.74
TraesCS3D01G285700.2	Wheat	plastid	82.43	80.18
Os05t0186300-01	Rice	cytosol, plasma membrane	71.07	80.18
Zm00001d043601_P003	Maize	mitochondrion	81.8	79.22
PGSC0003DMT400084201	Potato	cytosol	71.07	78.93
Solyc05g050120.2.1	Tomato	plastid	71.07	78.93
PGSC0003DMT400000961	Potato	cytosol	69.83	76.23
Solyc12g008430.1.1	Tomato	plastid	69.67	76.06
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	82.43	74.96
Os01t0743500-01	Rice	plasma membrane, plastid	67.34	74.02
Os01t0188400-01	Rice	plastid	70.45	70.89
Os02t0665000-01	Rice	cytosol	18.82	65.05
VIT_16s0039g00580.t01	Wine grape	cytosol	5.13	64.71
PGSC0003DMT400043836	Potato	cytosol	22.71	60.83
VIT_00s0342g00030.t01	Wine grape	cytosol	5.44	56.45
VIT_16s0039g01050.t01	Wine grape	cytosol	5.44	55.56
VIT_00s0183g00140.t01	Wine grape	cytosol	6.69	55.13
VIT_00s0279g00080.t01	Wine grape	cytosol	11.98	53.85
VIT_16s0115g00440.t01	Wine grape	cytosol	11.82	53.15
Os10t0503500-01	Rice	mitochondrion	35.46	36.77
Os07t0496200-01	Rice	mitochondrion	35.46	36.66

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	EntrezGene:4324717	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0004473	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006090	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872
GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf
InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os01g0723400	EnsemblPlants:Os01t0723400-04	PFAM:PF00390
PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26
SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0001C7EACA	SEG:seg

Description

NADP-MALIC ENZYME 2NADP-malic enzyme, Splicing variant (Os01t0723400-01);Similar to Malic enzyme. (Os01t0723400-02);NADP-malic enzyme, Salt and osmotic stress tolerance, Disease resistance (Os01t0723400-03);NADP-malic enzyme, Splicing variant (Os01t0723400-04);NADP-malic enzyme, Splicing variant (Os01t0723400-05)

Coordinates

chr1:+:30166024..30171659

Molecular Weight (calculated)

70486.4 Da

IEP (calculated)

5.525

GRAVY (calculated)

-0.092

Length

643 amino acids

Sequence
(BLAST)

001: MESTMKGIRG DNAPCVLDLD DAATVGGGVG DTYGEDCATE EQLVTPWTVS VASGYNLLRD PRYNKGLAFN ERERETHYLR GLLPPAIVSQ ELQERKIMHN
101: IRQYQLPLQK YMAMMDLQEG NERLFYKLLI DNVEELLPVV YTPTVGEACQ KYGSIFSRPQ GLYISLKEKG KILEVLKNWP ERSIQVIVVT DGERILGLGD
201: LGCQGMGIPV GKLALYTALG GVRPSACLPI TLDVGTNNEA LLNDEFYIGL RQKRATAQEY ADFLHEFMTA VKQNYGEKVL IQFEDFANHN AFELLAKYGT
301: THLVFNDDIQ GTASVVLSGL VAALKLVGGS LSEHSYLFLG AGEAGTGIAE LIALEISRQT KAPIEECRKK IWLVDSKGLI VSSRKETLQH FKKPWAHEHE
401: PVGNLLDAVK TIKPTVLIGT SGKGQTFTQE VVEAISSFNE RPVIFALSNP TSQSECTAEQ AYTWSKGRAV FASGSPFDPV EYDGKIYVPG QANNAYIFPG
501: FGLGVVMSGA IRVHDDMLLA ASEALAQQVT QENFDKGLTY PPFSNIRKIS AHIAANVAAK AYELGALGQR TWLSMQRAAC TAHFTATTGE SGHPVSGSIP
601: VMYIYELFPA KSYYLFSTAR CNSDESTGVT SSLFFPVSFM PVL

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.