Factsheet for TraesCS3A01G285900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33287	Sorghum	cytosol	93.27	93.42
TraesCS3D01G285700.2	Wheat	plastid	98.32	88.35
TraesCS3B01G320200.1	Wheat	cytosol, peroxisome, plastid	93.94	87.46
Zm00001d043601_P003	Maize	mitochondrion	93.1	83.28
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	98.48	82.74
Os01t0723400-04	Rice	plastid	89.39	82.58
TraesCS1A01G122500.1	Wheat	cytosol	78.62	81.93
Solyc05g050120.2.1	Tomato	plastid	78.28	80.31
PGSC0003DMT400084201	Potato	cytosol	78.11	80.14
PGSC0003DMT400000961	Potato	cytosol	78.11	78.78
Solyc12g008430.1.1	Tomato	plastid	77.1	77.76
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	71.04	74.3
TraesCS3A01G108900.1	Wheat	golgi	78.11	71.6
VIT_16s0039g00580.t01	Wine grape	cytosol	5.56	64.71
VIT_00s0183g00140.t01	Wine grape	cytosol	7.91	60.26
PGSC0003DMT400043836	Potato	cytosol	24.07	59.58
VIT_00s0342g00030.t01	Wine grape	cytosol	6.06	58.06
VIT_16s0039g01050.t01	Wine grape	cytosol	6.06	57.14
VIT_00s0279g00080.t01	Wine grape	cytosol	13.47	55.94
VIT_16s0115g00440.t01	Wine grape	cytosol	13.3	55.24
TraesCS2A01G237000.1	Wheat	mitochondrion	39.73	37.88

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287
GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS3A01G285900	EnsemblPlants:TraesCS3A01G285900.2	TIGR:cd05312	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:514311326..514316411

Molecular Weight (calculated)

65691.0 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.146

Length

594 amino acids

Sequence
(BLAST)

001: MESTMKEIRG GGAPCVLDMD DAATVGGGVE DTYGEDRATE EQLVTPWTVS VASGYNLLRD PRYNKGLAFT EKERETHYLR GLLPPTVISQ ELQERKIMHN
101: IRQYQLPLQR YMAMMDLQEG NERLFYKLLI DNVEELLPIV YTPTVGEACQ KYGSIFSRPQ GLYISLKEKG KILEVLKNWP ERSIQVIVVT DGERILGLGD
201: LGCQGMGIPV GKLSLYTALG GVRPSACLPI TLDVGTNNEE LLNDEFYIGL RQRRAIGQEY ADFLHEFMAA VKQNYGEKVL IQFEDFANHN AFDLLARYGT
301: THLVFNDDIQ GTASVVLAGL VAALKLVGGT LAEHTYLFLG AGEAGTGIAE LIALEMSRQV TKTPIDECRK KIWLVDSKGL IVSARKESLQ HFKKPWAHEH
401: EHVGNLLDAV NAIKPTVLIG TSGKGQTFTQ EVVEAISSFN EMPIILALSN PTSQAECTAE QAYTWSKGRA VFATGSPFDP VEYNGKIYVP GQANNAYIFP
501: GFGLGVVMSG AIRVHDDMLL AASEALAQQV TQENFDKGLI YPPFSNIRKI CAHIAANVAA KAYELGLASR RPRPKDLVKY AESCMYSPIY RNYR

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.