Factsheet for Zm00001d043601_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33287	Sorghum	cytosol	88.25	98.82
TraesCS3A01G285900.2	Wheat	cytosol	83.28	93.1
TraesCS3D01G285700.2	Wheat	plastid	85.24	85.63
TraesCS3B01G320200.1	Wheat	cytosol, peroxisome, plastid	79.67	82.92
Zm00001d037693_P003	Maize	extracellular	70.63	82.28
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	87.35	82.04
Os01t0723400-04	Rice	plastid	79.22	81.8
Zm00001d010358_P001	Maize	cytosol	69.73	81.23
Zm00001d012764_P001	Maize	cytosol	59.64	79.68
Zm00001d037961_P004	Maize	plastid	69.58	71.74
Zm00001d037962_P003	Maize	plastid	69.28	71.43
Zm00001d000316_P001	Maize	plastid	63.55	69.98
Zm00001d036873_P001	Maize	cytosol	5.12	68.0
Zm00001d034292_P001	Maize	cytosol	26.81	64.96
VIT_16s0039g00580.t01	Wine grape	cytosol	4.97	64.71
VIT_00s0342g00030.t01	Wine grape	cytosol	5.42	58.06
VIT_16s0039g01050.t01	Wine grape	cytosol	5.42	57.14
VIT_00s0183g00140.t01	Wine grape	cytosol	6.48	55.13
VIT_00s0279g00080.t01	Wine grape	cytosol	11.3	52.45
VIT_16s0115g00440.t01	Wine grape	cytosol	11.14	51.75
Zm00001d021546_P003	Maize	mitochondrion	35.99	38.61
Zm00001d013911_P001	Maize	mitochondrion	33.73	35.0
Zm00001d042392_P001	Maize	plastid	13.1	33.72
Zm00001d003090_P001	Maize	mitochondrion	14.01	27.27
Zm00001d051182_P001	Maize	cytosol	6.63	19.91

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	UniProt:A0A1D6NDJ5	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd
InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM38561.1
PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406
PANTHER:PTHR23406:SF26	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI000221DD8B
EnsemblPlantsGene:Zm00001d043601	EnsemblPlants:Zm00001d043601_P003	EnsemblPlants:Zm00001d043601_T003	SEG:seg	:	:

Description

NADP-dependent malic enzyme6 NADP-dependent malic enzyme6

Coordinates

chr3:-:204885528..204890476

Molecular Weight (calculated)

72867.3 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.205

Length

664 amino acids

Sequence
(BLAST)

001: MSPSNPLPPP GETRVGCSLP SPVTPQAMGG GPARHVAMRA LRARFLSRQR EGGPAAASTW WWCASGSAKG DMESTLKGIR GSDAPCVLDL DDAATVAGGV
101: EDTYGEDRAT EEQLVTPWTV SVASGYNLLR DPRYNKGLAF TERERETHYL RGLLPPAIVS QELQERKIMN NIRQYQLPLQ RYMALMDLQE GNERLFYKLL
201: IDNVEELLPI VYTPTVGEAC QKYGSIFSRP QGLYISLKEK GKILEVLKNW PERSIQVIVV TDGERILGLG DLGCQGMGIP VGKLSLYTAL GGVRPSACLP
301: ITLDVGTNNE ELLNDEFYIG LRQRRATGQE YTDFLQEFMT AVKQNYGEKV LIQFEDFANH NAFDLLARYG TTHLVFNDDI QGTASVVLAG LIAAQTLLGG
401: SLADHTYLFL GAGEAGTGIA ELIALEISRQ TKAPIEECRK KIWLVDSKGL IVSTRKESLQ HFKKPWAHEH KPLSNLLDAV NAIKPTVLIG TSGKGQTFTK
501: DVVEAISSFN ERPIILALSN PTSQSECTAE QAYTWSKGQA VFATGSPFDP VEYNGKIHVP GQANNAYIFP GFGLGVVMSG AIRVHDDMLL AASEALAQQV
601: TEENFEKGLI YPPFSNIRKI SAHIAASVAA KAYELGLASR RPRPKDLVKY AESCMYSPIY RNYR

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.