Factsheet for Zm00001d013911_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d050216_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00570.1	Zm00001d050216_P003	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38219	Sorghum	mitochondrion	90.94	94.17
Os10t0503500-01	Rice	mitochondrion	84.22	86.94
TraesCS1D01G164800.4	Wheat	mitochondrion, unclear	82.97	86.06
TraesCS1B01G190400.5	Wheat	mitochondrion	80.16	83.55
GSMUA_Achr1P00210_001	Banana	mitochondrion	70.94	75.17
VIT_15s0046g03670.t01	Wine grape	mitochondrion	70.62	74.71
Solyc01g094200.2.1	Tomato	plastid	69.53	74.04
HORVU1Hr1G045720.1	Barley	plastid	83.28	73.31
Bra037347.1-P	Field mustard	mitochondrion	67.03	73.08
KRH65116	Soybean	mitochondrion	68.91	73.01
KRH48207	Soybean	mitochondrion	68.59	72.68
CDY51151	Canola	mitochondrion	68.91	72.65
CDY68746	Canola	mitochondrion	68.44	72.4
KRH00689	Soybean	mitochondrion	67.66	72.17
CDY07209	Canola	mitochondrion	68.59	72.09
CDX74340	Canola	mitochondrion	68.44	72.04
KRH40505	Soybean	mitochondrion	67.19	71.55
PGSC0003DMT400000066	Potato	mitochondrion	69.69	71.13
AT4G00570.1	Thale cress	mitochondrion	67.34	71.0
Bra000967.1-P	Field mustard	mitochondrion	68.44	70.65
Zm00001d021546_P003	Maize	mitochondrion	58.75	60.74
Zm00001d010358_P001	Maize	cytosol	35.94	40.35
Zm00001d037693_P003	Maize	extracellular	35.62	40.0
Zm00001d012764_P001	Maize	cytosol	30.78	39.64
Zm00001d000316_P001	Maize	plastid	34.84	36.98
Zm00001d037962_P003	Maize	plastid	35.94	35.71
Zm00001d037961_P004	Maize	plastid	35.78	35.56
Zm00001d034292_P001	Maize	cytosol	15.0	35.04
Zm00001d036873_P001	Maize	cytosol	2.66	34.0
Zm00001d043601_P003	Maize	mitochondrion	35.0	33.73
Zm00001d042392_P001	Maize	plastid	9.38	23.26
Zm00001d003090_P001	Maize	mitochondrion	7.66	14.37
Zm00001d051182_P001	Maize	cytosol	3.75	10.86

Protein Annotations

EntrezGene:100501486	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1D6GNJ5	ProteinID:AQK64797.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF32	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI000843B65A	EnsemblPlantsGene:Zm00001d013911	EnsemblPlants:Zm00001d013911_P001	EnsemblPlants:Zm00001d013911_T001	SEG:seg	:

Description

Malic enzyme

Coordinates

chr5:-:24430939..24437600

Molecular Weight (calculated)

70825.6 Da

IEP (calculated)

8.422

GRAVY (calculated)

-0.131

Length

640 amino acids

Sequence
(BLAST)

001: MISPAMCRSA PRRAAQVRRL LSSAAPPAHA GAAVPGPCIV HKRGNDILHD PWYNKDTAFP MTERDRLGLR GLLPPRVMSF EQQYERFINS FRSLEHNTRG
101: EPDSIVALAK WRILNRLHDR NETLYYRVLI DNIKDFAPII YTPTVGLVCE NYSGLFRRPR GMYFSAKDKG EMMSMIYNWP AEKVDMIVVT DGSRILGLGD
201: LGVQGIGIPI GKLDVYVAAA GINPQKVLPI MLDVGTNNEK LLEDKLYLGL RQPRLEGEEY LAVVDEFMEA VHARWPKAVV QVLCFKATSM GFPYYFRSKY
301: CSLSEVIKSQ FEDFQMKWAF ETLQRYRNRF CMFNDDVQGT AGVALAGLLG AVRAQGRPLQ DFTNQKIVVV GAGSAGIGVL SMAKQAMLRM PGIHRTGEGH
401: NQFWVLDKDG LITKARKDLD SAVARFARGF GPDEVPDLYE GASLVEVVKK VKPHVLLGLS GVGGIFNEEV LKAMKESDSP RPAVFAMSNP TTKGEPNDKT
501: LILISFYYIT AECTPDDVFK HVGDKAIFAS GSPFSNVSLG NGKSGYANQA NNMYLFPGLA SYITDDEIRK GILFPSVSSI RHITARVGAA VVRAAVAEDL
601: AEGCCDVGPR ELGSMSESEA VDYVARKMWY PIYSPLVSDK

Best Arabidopsis Sequence Match ( AT4G00570.1 )
(BLAST)

001: MMWKNIAGLS KAAAAARTHG SRRCFSTAIP GPCIVHKRGA DILHDPWFNK DTGFPLTERD RLGIRGLLPP RVMTCVQQCD RFIESFRSLE NNTKGEPENV
101: VALAKWRMLN RLHDRNETLY YRVLIDNIKD FAPIIYTPTV GLVCQNYSGL YRRPRGMYFS AKDKGEMMSM IYNWPAPQVD MIVITDGSRI LGLGDLGVQG
201: IGIPIGKLDM YVAAAGINPQ RVLPIMLDVG TNNEKLLQND LYLGVRQPRL EGEEYLEIID EFMEAAFTRW PKAVVQFEDF QAKWAFGTLE RYRKKFCMFN
301: DDVQGTAGVA LAGLLGTVRA QGRPISDFVN QKIVVVGAGS AGLGVTKMAV QAVARMAGIS ESEATKNFYL IDKDGLVTTE RTKLDPGAVL FAKNPAEIRE
401: GASIVEVVKK VRPHVLLGLS GVGGIFNEEV LKAMRESDSC KPAIFAMSNP TLNAECTAAD AFKHAGGNIV FASGSPFENV ELENGKVGHV NQANNMYLFP
501: GIGLGTLLSG ARIVTDGMLQ AASECLASYM TDEEVQKGIL YPSINNIRHI TAEVGAAVLR AAVTDDIAEG HGDVGPKDLS HMSKEDTVNY ITRNMWFPVY
601: SPLVHEK

Arabidopsis Description

NAD-ME2NAD-dependent malic enzyme 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7K9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.