Factsheet for Zm00001d042392_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043836	Potato	cytosol	19.38	20.83
Zm00001d012764_P001	Maize	cytosol	37.6	19.52
Solyc12g008430.1.1	Tomato	plastid	34.5	15.11
Zm00001d037693_P003	Maize	extracellular	32.95	14.91
Zm00001d010358_P001	Maize	cytosol	31.78	14.39
Zm00001d037961_P004	Maize	plastid	34.11	13.66
Zm00001d037962_P003	Maize	plastid	34.11	13.66
Zm00001d043601_P003	Maize	mitochondrion	33.72	13.1
Zm00001d000316_P001	Maize	plastid	25.97	11.11
Zm00001d021546_P003	Maize	mitochondrion	24.81	10.34
Zm00001d013911_P001	Maize	mitochondrion	23.26	9.38
Zm00001d036873_P001	Maize	cytosol	1.16	6.0
Zm00001d034292_P001	Maize	cytosol	5.04	4.74
Zm00001d003090_P001	Maize	mitochondrion	6.2	4.69
Zm00001d051182_P001	Maize	cytosol	3.49	4.07

Protein Annotations

EnsemblPlants:Zm00001d042392_P001	EnsemblPlants:Zm00001d042392_T001	EnsemblPlantsGene:Zm00001d042392	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0051287	InterPro:Malic_NAD-bd	InterPro:NAD(P)-bd_dom_sf	InterPro:QWRF	PANTHER:PTHR31807
PANTHER:PTHR31807:SF8	PFAM:PF03949	PFAM:PF04484	ProteinID:ONM35217.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI000844C85E	UniProt:A0A1D6N3E9	MapMan:35.1	:	:	:

Description

NADP-dependent malic enzyme 1

Coordinates

chr3:+:164352888..164354875

Molecular Weight (calculated)

27596.7 Da

IEP (calculated)

9.263

GRAVY (calculated)

-0.234

Length

258 amino acids

Sequence
(BLAST)

001: MAFDSTTSLS LSDPAAAAAP DLYMSSDTDI VSSGSNSGAS DPPRRVISVS ARFCQKTNSR LRRILEPRLP LLLSSRRSFS DSPMSPRLPG RSPSPCRESR
101: GGDSPSRGRS WEASPNGHMV QALANAPSII NFAAEWRCIN AQTDATLLVQ SFTAEGLIVA SREETLQSFK KRYAHEHEPV KDLLGAVKAI RPTALIGSAG
201: VGQSFTKEVI EAMSSINELY DQVTGDVICH GEKTSYKMGA RAILVAIRGV GKALSISS

Best Arabidopsis Sequence Match ( AT2G19900.2 )
(BLAST)

001: MALTELQERN ERLFYKLLID NVEELLPIVY TPTVGEACQK FGSIFRRPQG LFISLKDKGK ILDVLKNWPE RNIQVIVVTD GERILGLGDL GCQGMGIPVG
101: KLALYSALGG VRPSACLPVT IDVGTNNEKL LNDEFYIGLR QKRATGQEYS ELLNEFMSAV KQNYGEKVLI QFEDFANHNA FELLAKYSDT HLVFNDDIQG
201: TASVVLAGLV SAQKLTNSPL AEHTFLFLGA GEAGTGIAEL IALYMSKQMN ASVEESRKKI WLVDSKGLIV NSRKDSLQDF KKPWAHEHEP VKDLLGAIKA
301: IKPTVLIGSS GVGRSFTKEV IEAMSSINER PLIMALSNPT TQSECTAEEA YTWSKGRAIF ASGSPFDPVE YEGKVFVSTQ ANNAYIFPGF GLGLVISGAI
401: RVHDDMLLAA AEALAGQVSK ENYEKGMIYP SFSSIRKISA QIAANVATKA YELGLAGRLP RPKDIVKCAE SSMYSPTYRL YR

Arabidopsis Description

NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.