Factsheet for Bra000967.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra038553.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00570.1	Bra038553.1-P	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68746	Canola	mitochondrion	96.45	98.84
CDX74340	Canola	mitochondrion	96.61	98.52
Bra037347.1-P	Field mustard	mitochondrion	91.94	97.1
AT4G00570.1	Thale cress	mitochondrion	89.35	91.27
VIT_15s0046g03670.t01	Wine grape	mitochondrion	82.1	84.13
KRH48207	Soybean	mitochondrion	80.16	82.28
KRH65116	Soybean	mitochondrion	79.68	81.79
KRH00689	Soybean	mitochondrion	78.23	80.83
Solyc01g094200.2.1	Tomato	plastid	77.9	80.37
KRH40505	Soybean	mitochondrion	77.9	80.37
PGSC0003DMT400000066	Potato	mitochondrion	77.9	77.03
GSMUA_Achr1P00210_001	Banana	mitochondrion	73.23	75.17
KXG38219	Sorghum	mitochondrion	74.35	74.6
TraesCS1D01G164800.4	Wheat	mitochondrion, unclear	73.71	74.07
Os10t0503500-01	Rice	mitochondrion	74.03	74.03
TraesCS1B01G190400.5	Wheat	mitochondrion	71.61	72.31
Zm00001d013911_P001	Maize	mitochondrion	70.65	68.44
HORVU1Hr1G045720.1	Barley	plastid	73.87	63.0
Bra037210.1-P	Field mustard	mitochondrion	60.81	61.0
Bra039029.1-P	Field mustard	cytosol	36.94	39.35
Bra009866.1-P	Field mustard	cytosol	36.77	38.78
Bra006107.1-P	Field mustard	cytosol	36.77	38.78
Bra023336.1-P	Field mustard	cytosol	36.29	38.27
Bra003738.1-P	Field mustard	plastid	34.03	33.23

Protein Annotations

MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra000967	EnsemblPlants:Bra000967.1	EnsemblPlants:Bra000967.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114
InterPro:IPR037062	UniProt:M4C9T8	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF32	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI0002540773	SEG:seg	:	:	:

Description

AT2G13560 (E=2e-188) | malate oxidoreductase, putative

Coordinates

chrA03:+:14163068..14166645

Molecular Weight (calculated)

68294.4 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.083

Length

620 amino acids

Sequence
(BLAST)

001: MWRNIARFSK TAAAAGRTGG SRRCLSTAIP GPCIVHKRGS DILHDPWFNK DTGFPLTERD RLGLRGLLPP RIISFEQQYD RFIESFRSLE RNTLGQPDNV
101: VSLAKWRILN RLHDRNETLY YRVLIDNIKD FAPIIYTPTV GLVCQNYSGL YRRPRGMYFS AKDKGEMMSM IYNWPAHQVD MIVITDGSRI PGLGDLGVQG
201: IGIPIGKLDM YVAAAGINPQ RVLPIMLDVG TNNQNLLQNP LYLGLRQPRL EGEEYLEIVD EFMEAVFTRW PKAVVQFEDF QAKWAFETLD RYRKKFCMFN
301: DDVQGTAGVA LAGLLGTVRA QGRPLSDFVN QKIVVVGAGS AGLGVTKTAV QAVARMAGIS FAEATKNFYL IDKDGLVTTE RSKLDPAVVP FAKNPAEIRE
401: GASIVEVVKT VRPHVLLGLS GVGGIFNEEV VLLTYSGFKN AKVLKAMRES DSCKPAIFAM SNPTLNAECT AADAFKHAGE NIVFGSGSPL ENVQLENGNV
501: GHVNQANNMY LFPGIGLGTL LSGARIVTDG MLLAAAECLA SYMTDEEVQK GILYPSINNI RHITAEVGAA VLRAAVSDDI VEGHGDVGPR DLSHMSKEET
601: VDYITRNMWF PIYSPLVHEK

Best Arabidopsis Sequence Match ( AT4G00570.1 )
(BLAST)

001: MMWKNIAGLS KAAAAARTHG SRRCFSTAIP GPCIVHKRGA DILHDPWFNK DTGFPLTERD RLGIRGLLPP RVMTCVQQCD RFIESFRSLE NNTKGEPENV
101: VALAKWRMLN RLHDRNETLY YRVLIDNIKD FAPIIYTPTV GLVCQNYSGL YRRPRGMYFS AKDKGEMMSM IYNWPAPQVD MIVITDGSRI LGLGDLGVQG
201: IGIPIGKLDM YVAAAGINPQ RVLPIMLDVG TNNEKLLQND LYLGVRQPRL EGEEYLEIID EFMEAAFTRW PKAVVQFEDF QAKWAFGTLE RYRKKFCMFN
301: DDVQGTAGVA LAGLLGTVRA QGRPISDFVN QKIVVVGAGS AGLGVTKMAV QAVARMAGIS ESEATKNFYL IDKDGLVTTE RTKLDPGAVL FAKNPAEIRE
401: GASIVEVVKK VRPHVLLGLS GVGGIFNEEV LKAMRESDSC KPAIFAMSNP TLNAECTAAD AFKHAGGNIV FASGSPFENV ELENGKVGHV NQANNMYLFP
501: GIGLGTLLSG ARIVTDGMLQ AASECLASYM TDEEVQKGIL YPSINNIRHI TAEVGAAVLR AAVTDDIAEG HGDVGPKDLS HMSKEDTVNY ITRNMWFPVY
601: SPLVHEK

Arabidopsis Description

NAD-ME2NAD-dependent malic enzyme 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7K9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.