Factsheet for Bra039029.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35901	Canola	cytosol	99.14	99.14
AT2G19900.1	Thale cress	cytosol	94.16	94.32
CDX82748	Canola	cytosol	90.72	90.57
KRH07269	Soybean	cytosol	80.41	79.19
Zm00001d012764_P001	Maize	cytosol	67.35	78.87
KRH74263	Soybean	cytosol	80.07	78.85
GSMUA_AchrUn_...	Banana	cytosol	79.21	78.14
VIT_11s0016g03210.t01	Wine grape	cytosol	79.04	77.83
GSMUA_Achr7P13690_001	Banana	cytosol	75.26	76.17
Os01t0743500-01	Rice	plasma membrane, plastid	76.12	75.73
EES01460	Sorghum	cytosol	76.12	74.7
Bra023336.1-P	Field mustard	cytosol	74.91	74.15
Bra009866.1-P	Field mustard	cytosol	74.74	73.98
KRH60218	Soybean	mitochondrion	80.41	73.93
KRH12915	Soybean	cytosol	14.09	73.87
Bra006107.1-P	Field mustard	cytosol	74.4	73.64
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	70.96	72.71
KRH41507	Soybean	cytosol, peroxisome, plastid	68.56	71.12
TraesCS3B01G309300.1	Wheat	mitochondrion	74.91	70.21
GSMUA_Achr3P31710_001	Banana	cytosol	77.49	69.17
HORVU3Hr1G070850.1	Barley	mitochondrion	73.88	69.02
GSMUA_Achr10P...	Banana	plastid	77.32	68.29
Bra003738.1-P	Field mustard	plastid	72.16	66.14
TraesCS3D01G275500.1	Wheat	cytosol	74.91	63.19
Bra037210.1-P	Field mustard	mitochondrion	42.1	39.64
Bra037347.1-P	Field mustard	mitochondrion	38.32	37.99
Bra000967.1-P	Field mustard	mitochondrion	39.35	36.94

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	EnsemblPlantsGene:Bra039029	EnsemblPlants:Bra039029.1	EnsemblPlants:Bra039029.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0004473
GO:GO:0005488	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016491	GO:GO:0046872	GO:GO:0051260	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062
UniProt:M4FD59	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF35	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI0002540FA1	SEG:seg	:	:	:	:

Description

AT2G19900 (E=1e-314) ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzyme 1); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor

Coordinates

chrA07:+:657378..660453

Molecular Weight (calculated)

64402.4 Da

IEP (calculated)

7.103

GRAVY (calculated)

-0.173

Length

582 amino acids

Sequence
(BLAST)

001: MEKNVKNSDM KSSVNGGVVD VYGEDSATIE HSITPWSLSV SSGYSLLRDP RYNKGLAFSE KERDTHYLRG LLPPAVVDQN LQEKRLINNI RQYQFPLQKY
101: MALTELQERN ERLFYKLLID HVEELLPIVY TPTVGEACQK YGSIFRRPQG LFISLKEKGK ILDVLKNWPE RNIQVIVVTD GERILGLGDL GCQGMGIPVG
201: KLALYTALGG VRPSACLPVT IDVGTNNEKL LNDEFYIGLK QKRATGQEYR DLLHEFMSAV KQNYGENVLI QFEDFANHNA FELLAKYRDS HLVFNDDIQG
301: TAAVVLAGLV SAQKLTNSPL AEHTFLFLGA GEAGTGIAEL IALYISKQMN ASVEESRKKI WLVDSKGLIV NSRKESLQAF KKPWAHEHEP VNDLLGAIKA
401: IKPNVLIGSA GIGRSFTKEV IEAMSSINER PLIMALSNPT TQSECTAEEA YTWSKGRAIF ASGSPFDPVE YEGSVFVSTQ ANNAYIFPGF GLGLVISGAV
501: RVHDDMLLAA AEALAGQVSK ENYEKGMIYP SFSSIRKISA HIAANVATKA YELGLAGRLP RPKEIVKCAE SSMYSPTYRI YR

Best Arabidopsis Sequence Match ( AT2G19900.1 )
(BLAST)

001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R

Arabidopsis Description

NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.