Factsheet for TraesCS3A01G275600.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G309300.1	Wheat	mitochondrion	96.13	87.92
HORVU3Hr1G070850.1	Barley	mitochondrion	93.84	85.55
Os01t0743500-01	Rice	plasma membrane, plastid	87.32	84.79
Zm00001d012764_P001	Maize	cytosol	72.18	82.5
EES01460	Sorghum	cytosol	85.92	82.29
TraesCS3D01G275500.1	Wheat	cytosol	95.77	78.84
GSMUA_AchrUn_...	Banana	cytosol	76.94	74.07
VIT_11s0016g03210.t01	Wine grape	cytosol	76.23	73.27
AT2G19900.1	Thale cress	cytosol	74.3	72.63
TraesCS1A01G122500.1	Wheat	cytosol	72.89	72.63
KRH07269	Soybean	cytosol	75.0	72.08
KRH74263	Soybean	cytosol	74.65	71.74
KRH12915	Soybean	cytosol	13.91	71.17
TraesCS3A01G285900.2	Wheat	cytosol	74.3	71.04
Bra039029.1-P	Field mustard	cytosol	72.71	70.96
CDY35901	Canola	cytosol	72.01	70.27
CDX82748	Canola	cytosol	70.07	68.27
KRH60218	Soybean	mitochondrion	75.53	67.77
KRH41507	Soybean	cytosol, peroxisome, plastid	64.08	64.88
TraesCS3A01G108900.1	Wheat	golgi	73.77	64.66
TraesCS2A01G237000.1	Wheat	mitochondrion	40.14	36.6

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287
GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF36	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS3A01G275600	EnsemblPlants:TraesCS3A01G275600.2	TIGR:cd05312	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:505221882..505226185

Molecular Weight (calculated)

62335.9 Da

IEP (calculated)

5.710

GRAVY (calculated)

-0.109

Length

568 amino acids

Sequence
(BLAST)

001: MAGRSGEEAD AAMAGVATGG VEDAYGEDRA TEDQPVTPWA VCIASGHSLL RDPRHNKGLS FTEKERDAHY LRGLLPPAIL PQELQEKRLL QNVRQLEVPL
101: QRYMFLMDLQ ERNERLFYKL MIDNVEELLP VVYTPTVGEA CQKYGSIFRR SQGLYISLKD KGRVLELLRN WPEKSIQVIV VTDGERILGL GDLGCQGMGI
201: PVGKLALYTA LGGVRPSACL PITIDVGTNN EELLNDEFYI GLRQRRATGQ EYTELLDEFM VAVKQNYGQK VLVQFEDFAN HNAFALLDKY KATHLVFNDD
301: IQGTAAVVLA GLMAGLKFAG GTLADHTFLF FGAGEAGTGI AELVALEISM QSKTSQEEAH KNIWLVDSKG LIVSSRKDSI QPFKKLYAHE HEPVKDLLSA
401: IKDIKPTALI GSAGVGQSFT KEVIEAMSSI NKRPIILALS NPTSKSECTA EQAYSWSQGR AIFGSGSPFD PVKYNEKLFV PAQANNAYIF PGFGLGVVIS
501: GAIRVKDDMV LAAAEALAEQ VTAEHFDKGL IYPPFSSIRK ISTNIAARVA AKAYDLDWQA ISLAQKTW

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.