Factsheet for VIT_11s0016g03210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	85.62	85.76
KRH07269	Soybean	cytosol	85.62	85.62
GSMUA_Achr7P13690_001	Banana	cytosol	82.91	85.22
VIT_04s0008g00180.t01	Wine grape	cytosol	84.26	85.13
KRH74263	Soybean	cytosol	84.94	84.94
KRH12915	Soybean	cytosol	15.4	81.98
Zm00001d012764_P001	Maize	cytosol	68.19	81.09
KRH60218	Soybean	mitochondrion	86.46	80.73
AT2G19900.1	Thale cress	cytosol	79.36	80.72
Bra039029.1-P	Field mustard	cytosol	77.83	79.04
Os01t0743500-01	Rice	plasma membrane, plastid	77.83	78.63
VIT_09s0002g03620.t01	Wine grape	cytosol	84.94	78.44
CDY35901	Canola	cytosol	77.16	78.35
KRH41507	Soybean	cytosol, peroxisome, plastid	73.77	77.72
EES01460	Sorghum	cytosol	77.33	77.07
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	73.27	76.23
GSMUA_Achr10P...	Banana	plastid	83.76	75.11
TraesCS3B01G309300.1	Wheat	mitochondrion	77.5	73.75
GSMUA_Achr3P31710_001	Banana	cytosol	81.05	73.47
CDX82748	Canola	cytosol	72.25	73.24
HORVU3Hr1G070850.1	Barley	mitochondrion	75.8	71.91
VIT_02s0012g02460.t01	Wine grape	endoplasmic reticulum, plasma membrane	51.78	70.83
VIT_16s0039g00580.t01	Wine grape	cytosol	5.75	66.67
TraesCS3D01G275500.1	Wheat	cytosol	77.16	66.09
VIT_00s0342g00030.t01	Wine grape	cytosol	6.26	59.68
VIT_00s0183g00140.t01	Wine grape	cytosol	7.78	58.97
VIT_16s0039g01050.t01	Wine grape	cytosol	6.26	58.73
VIT_00s0279g00080.t01	Wine grape	cytosol	13.54	55.94
VIT_03s0038g00040.t01	Wine grape	extracellular	6.77	55.56
VIT_16s0115g00440.t01	Wine grape	cytosol	13.37	55.24
VIT_16s0039g00360.t01	Wine grape	extracellular	6.6	54.17
VIT_15s0045g00190.t01	Wine grape	extracellular	6.43	52.78
VIT_15s0046g03670.t01	Wine grape	mitochondrion	40.1	39.17
VIT_15s0021g00500.t01	Wine grape	mitochondrion	41.12	38.88

Protein Annotations

EntrezGene:100233140	wikigene:100233140	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	ProteinID:AAA67087
ProteinID:AAA67087.1	ProteinID:CBI28009	ProteinID:CBI28009.3	UniProt:D7TBH4	EMBL:FN595756	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0004473	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006090	GO:GO:0006108
GO:GO:0008150	GO:GO:0008152	GO:GO:0008948	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016043	GO:GO:0016491	GO:GO:0046872	GO:GO:0051260	GO:GO:0051287	GO:GO:0055114
InterPro:IPR037062	EMBL:L34836	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	EntrezGene:NADP-ME	wikigene:NADP-ME	PFAM:PF00390	PFAM:PF03949
PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SMART:SM00919
SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223	TIGR:TC51741	TIGR:TC63549	UniParc:UPI00019842AB
ArrayExpress:VIT_11s0016g03210	EnsemblPlantsGene:VIT_11s0016g03210	EnsemblPlants:VIT_11s0016g03210.t01	unigene:Vvi.16085	unigene:Vvi.3190	:

Description

Malic enzyme [Source:UniProtKB/TrEMBL;Acc:D7TBH4]

Coordinates

chr11:-:2574483..2579566

Molecular Weight (calculated)

65284.8 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.143

Length

591 amino acids

Sequence
(BLAST)

001: MESTLKDIRD GASVLDLDPK ATVGGGVEDL YGEDFATEDQ LVTPWTVSVA SGYSLLRDPR HNKGLAFNDK ERDAHYLCGL LPPVVSTQEL QERKLMNSIR
101: QYQVPLQKYM AMMDLQERNE RLFYKLLIDN VEELLPVVYT PTVGEACQKY GSIFRRPQGL YISLKEKGKI LEVLKNWPER RIQVIVVTDG ERILGLGDLG
201: CQGMGIPVGK LSLYTALGGV RPSACLPITI DVGTNNEKLL ANEFYIGLKQ RRATGKEYSE FLQEFMSAVK QNYGEKVLIQ FEDFANHNAF DLLAKYGTTH
301: LVFNDDIQGT ASVVLAGIVS ALRLLGGTLA DHKFLFLGAG EAGTGIAELI ALEMSKQTKC PIEETRKKIW LVDSKGLIVS SRKDSLQQFK KPWAHEHEPV
401: KDLLHAVKVI KPTVLIGSSG VGKAFTKEVI EAMASCNEKP LILALSNPTS QSECTAEEAY TWTQGRAIFA SGSPFDPVEY NGKTFVPGQA NNAYIFPGLG
501: MGLVISGAIR VHDEMLLAAS EALARQVTQE NFDKGLIYPP FSNIRKISAH IAANVAAKAY ELGLATRLPQ PENLVKYAES CMYSPVYRSY R

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.