CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039029.1-P	Field mustard	cytosol	90.57	90.72
CDY35901	Canola	cytosol	90.39	90.55
AT2G19900.1	Thale cress	cytosol	86.28	86.57
KRH12915	Soybean	cytosol	14.07	73.87
KRH07269	Soybean	cytosol	74.61	73.6
KRH74263	Soybean	cytosol	74.27	73.27
GSMUA_AchrUn_...	Banana	cytosol	73.76	72.88
VIT_11s0016g03210.t01	Wine grape	cytosol	73.24	72.25
Zm00001d012764_P001	Maize	cytosol	61.41	72.03
GSMUA_Achr7P13690_001	Banana	cytosol	69.64	70.61
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	68.27	70.07
Os01t0743500-01	Rice	plasma membrane, plastid	70.15	69.91
CDX78432	Canola	cytosol	69.64	69.05
KRH60218	Soybean	mitochondrion	74.96	69.04
CDX91199	Canola	cytosol	69.47	68.88
EES01460	Sorghum	cytosol	69.98	68.8
CDX70409	Canola	cytosol	69.3	68.71
CDY61446	Canola	cytosol	69.13	68.54
CDX88203	Canola	cytosol	68.95	68.37
CDX80544	Canola	cytosol	68.78	68.2
KRH41507	Soybean	cytosol, peroxisome, plastid	63.81	66.31
TraesCS3B01G309300.1	Wheat	mitochondrion	69.13	64.9
GSMUA_Achr3P31710_001	Banana	cytosol	71.53	63.96
GSMUA_Achr10P...	Banana	plastid	71.87	63.58
HORVU3Hr1G070850.1	Barley	mitochondrion	67.92	63.56
CDX68115	Canola	plastid	69.3	61.87
CDX85926	Canola	plastid	65.87	61.24
TraesCS3D01G275500.1	Wheat	cytosol	69.13	58.41
CDY02046	Canola	mitochondrion	55.4	57.78
CDY33808	Canola	endoplasmic reticulum, extracellular	3.26	54.29
CDY37211	Canola	mitochondrion	38.94	36.73
CDX81448	Canola	mitochondrion	38.77	36.57
CDY68746	Canola	mitochondrion	36.88	35.54
CDX74340	Canola	mitochondrion	37.05	35.53
CDY51151	Canola	mitochondrion	36.88	35.42
CDY07209	Canola	mitochondrion	36.88	35.3

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:A0A078D676	EnsemblPlants:CDX82748	ProteinID:CDX82748
ProteinID:CDX82748.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00138059001
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF35	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI0004EDBA56	SEG:seg	:	:	:	:

Description

BnaC07g01180D

Coordinates

chrLK031829:-:1913070..1916054

Molecular Weight (calculated)

65250.5 Da

IEP (calculated)

7.202

GRAVY (calculated)

-0.189

Length

583 amino acids

Sequence
(BLAST)

001: MESVKNSDLK SSVNGGVVDV YGEDSATIEH SITPWSLSVS SGYSLLRDPR YNKGLAFSEK ERDTHYLRGL LPPAVVDQNL QEKRLINNIR QYQYPLQKYM
101: ALTELQERNE RLFYKLLIDH VEELLPIVYT PTVGEACQKY GSIFRRPQGL FISLKERGKI LDVLKNWHER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYTALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLKQ KRATGQEYRD LLHEFMSAVK QNYGENVLIQ FEDFANHNAF QLLAKYRDTH LVFNDDIQGT
301: AAVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYISKQMNA SVEESRKKIW LVDSKGLIVN SRKESLQAFK KPWAHEHEPV NDLLGAIKAI
401: KPNVLIGSAG IGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGSVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPI NLSDYHNERS TIWLIILRMI FIRNERLLIN LSDYHKVRRI HYLQNPRSCS KRC

Best Arabidopsis Sequence Match ( AT2G19900.1 )
(BLAST)

001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R

Arabidopsis Description

NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.