Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039029.1-P | Field mustard | cytosol | 94.32 | 94.16 |
| CDY35901 | Canola | cytosol | 93.46 | 93.3 |
| CDX82748 | Canola | cytosol | 86.57 | 86.28 |
| KRH07269 | Soybean | cytosol | 81.76 | 80.37 |
| KRH74263 | Soybean | cytosol | 81.58 | 80.2 |
| VIT_11s0016g03210.t01 | Wine grape | cytosol | 80.72 | 79.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.21 | 78.98 |
| Zm00001d012764_P001 | Maize | cytosol | 67.47 | 78.87 |
| KRH12915 | Soybean | cytosol | 14.8 | 77.48 |
| Os01t0743500-01 | Rice | plasma membrane, plastid | 77.45 | 76.92 |
| GSMUA_Achr7P13690_001 | Banana | cytosol | 75.9 | 76.7 |
| EES01460 | Sorghum | cytosol | 77.11 | 75.55 |
| AT5G11670.1 | Thale cress | cytosol | 76.25 | 75.34 |
| KRH60218 | Soybean | mitochondrion | 81.41 | 74.72 |
| AT5G25880.1 | Thale cress | cytosol | 75.56 | 74.66 |
| TraesCS3A01G275600.2 | Wheat | cytosol, peroxisome, plastid | 72.63 | 74.3 |
| TraesCS3B01G309300.1 | Wheat | mitochondrion | 77.11 | 72.14 |
| KRH41507 | Soybean | cytosol, peroxisome, plastid | 68.85 | 71.3 |
| HORVU3Hr1G070850.1 | Barley | mitochondrion | 76.08 | 70.95 |
| GSMUA_Achr10P... | Banana | plastid | 78.83 | 69.5 |
| GSMUA_Achr3P31710_001 | Banana | cytosol | 77.62 | 69.17 |
| AT1G79750.1 | Thale cress | plastid | 76.25 | 68.58 |
| TraesCS3D01G275500.1 | Wheat | cytosol | 77.11 | 64.93 |
| AT2G13560.1 | Thale cress | mitochondrion | 41.82 | 39.0 |
| AT4G00570.1 | Thale cress | mitochondrion | 39.76 | 38.06 |
Protein Annotations
| Gene3D:3.40.50.10380 | Gene3D:3.40.50.720 | MapMan:5.1.1.4 | EntrezGene:816509 | UniProt:A0A178VRX4 | ProteinID:AAC62126.1 |
| ProteinID:AEC06941.1 | ArrayExpress:AT2G19900 | EnsemblPlantsGene:AT2G19900 | RefSeq:AT2G19900 | TAIR:AT2G19900 | RefSeq:AT2G19900-TAIR-G |
| EnsemblPlants:AT2G19900.1 | TAIR:AT2G19900.1 | Symbol:ATNADP-ME1 | EMBL:AY062734 | Unigene:At.27251 | EMBL:BT003371 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004470 | GO:GO:0004471 | GO:GO:0004473 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006090 | GO:GO:0006108 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008948 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0051260 |
| GO:GO:0051287 | GO:GO:0055114 | InterPro:IPR037062 | InterPro:Malic_NAD-bd | InterPro:Malic_N_dom | InterPro:Malic_N_dom_sf |
| InterPro:Malic_OxRdtase | InterPro:Malic_enzyme_CS | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_179580.1 | UniProt:O82191 | ProteinID:OAP07895.1 |
| PFAM:PF00390 | PFAM:PF03949 | PIRSF:PIRSF000106 | PO:PO:0000084 | PO:PO:0004507 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 | PRINTS:PR00072 | ScanProsite:PS00331 |
| PANTHER:PTHR23406 | PANTHER:PTHR23406:SF35 | SMART:SM00919 | SMART:SM01274 | SUPFAM:SSF51735 | SUPFAM:SSF53223 |
| UniParc:UPI000000BFDC | SEG:seg | : | : | : | : |
Description
NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
Coordinates
chr2:-:8591808..8595559
Molecular Weight (calculated)
64282.3 Da
IEP (calculated)
6.728
GRAVY (calculated)
-0.170
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.