Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85926 | Canola | plastid | 85.14 | 87.72 |
| CDX68115 | Canola | plastid | 88.24 | 87.29 |
| Bra003738.1-P | Field mustard | plastid | 85.29 | 86.77 |
| KRH09931 | Soybean | mitochondrion, plastid | 77.86 | 78.23 |
| PGSC0003DMT400068027 | Potato | plastid | 77.09 | 77.81 |
| HORVU5Hr1G053200.1 | Barley | endoplasmic reticulum, extracellular | 7.74 | 76.92 |
| KRH23402 | Soybean | nucleus | 76.94 | 76.82 |
| VIT_09s0002g03620.t01 | Wine grape | cytosol | 75.7 | 76.41 |
| AT2G19900.1 | Thale cress | cytosol | 68.58 | 76.25 |
| AT5G11670.1 | Thale cress | cytosol | 68.89 | 75.68 |
| AT5G25880.1 | Thale cress | cytosol | 68.73 | 75.51 |
| PGSC0003DMT400006726 | Potato | plastid | 74.92 | 75.39 |
| KRH44278 | Soybean | plastid | 74.77 | 75.35 |
| Solyc08g066290.2.1 | Tomato | cytosol | 7.59 | 68.06 |
| KRH47214 | Soybean | mitochondrion | 52.48 | 58.96 |
| AT2G13560.1 | Thale cress | mitochondrion | 37.15 | 38.52 |
| AT4G00570.1 | Thale cress | mitochondrion | 35.29 | 37.56 |
| KRH01213 | Soybean | cytosol, plastid | 15.94 | 36.27 |
Protein Annotations
| Gene3D:3.40.50.10380 | Gene3D:3.40.50.720 | MapMan:5.1.1.4 | EntrezGene:844314 | UniProt:A0A178W4H6 | ProteinID:AAF68116.1 |
| ProteinID:AAG52235.1 | ProteinID:AEE36294.1 | EMBL:AK222053 | ArrayExpress:AT1G79750 | EnsemblPlantsGene:AT1G79750 | RefSeq:AT1G79750 |
| TAIR:AT1G79750 | RefSeq:AT1G79750-TAIR-G | EnsemblPlants:AT1G79750.1 | TAIR:AT1G79750.1 | Symbol:ATNADP-ME4 | EMBL:AY060584 |
| EMBL:AY142064 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004470 | GO:GO:0004471 |
| GO:GO:0004473 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006090 | GO:GO:0006108 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0008948 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016491 | GO:GO:0042803 | GO:GO:0046872 | GO:GO:0050897 |
| GO:GO:0051287 | GO:GO:0051289 | GO:GO:0055114 | InterPro:IPR037062 | InterPro:Malic_NAD-bd | InterPro:Malic_N_dom |
| InterPro:Malic_N_dom_sf | InterPro:Malic_OxRdtase | InterPro:Malic_enzyme_CS | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_178093.1 | ProteinID:OAP13377.1 |
| PFAM:PF00390 | PFAM:PF03949 | PIRSF:PIRSF000106 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00072 | ScanProsite:PS00331 | PANTHER:PTHR23406 | PANTHER:PTHR23406:SF36 |
| UniProt:Q9CA83 | SMART:SM00919 | SMART:SM01274 | SUPFAM:SSF51735 | SUPFAM:SSF53223 | UniParc:UPI000009E235 |
| SEG:seg | : | : | : | : | : |
Description
NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
Coordinates
chr1:-:30007288..30011690
Molecular Weight (calculated)
71164.7 Da
IEP (calculated)
6.564
GRAVY (calculated)
-0.124
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.