CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41507	Soybean	cytosol, peroxisome, plastid	86.49	17.11
KRH07269	Soybean	cytosol	90.09	16.92
KRH74263	Soybean	cytosol	88.29	16.58
Zm00001d012764_P001	Maize	cytosol	69.37	15.49
GSMUA_AchrUn_...	Banana	cytosol	81.98	15.42
VIT_11s0016g03210.t01	Wine grape	cytosol	81.98	15.4
KRH60218	Soybean	mitochondrion	86.49	15.17
AT2G19900.1	Thale cress	cytosol	77.48	14.8
GSMUA_Achr7P13690_001	Banana	cytosol	74.77	14.43
Bra039029.1-P	Field mustard	cytosol	73.87	14.09
CDX82748	Canola	cytosol	73.87	14.07
CDY35901	Canola	cytosol	72.97	13.92
KRH47214	Soybean	mitochondrion	72.07	13.91
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	71.17	13.91
KRH52781	Soybean	mitochondrion	77.48	13.89
KRH09931	Soybean	mitochondrion, plastid	79.28	13.69
KRH62099	Soybean	mitochondrion	76.58	13.67
KRH23402	Soybean	nucleus	78.38	13.45
GSMUA_Achr3P31710_001	Banana	cytosol	78.38	13.34
EES01460	Sorghum	cytosol	70.27	13.15
GSMUA_Achr10P...	Banana	plastid	77.48	13.05
TraesCS3B01G309300.1	Wheat	mitochondrion	72.07	12.88
KRH44278	Soybean	plastid	72.97	12.64
Os01t0743500-01	Rice	plasma membrane, plastid	65.77	12.48
HORVU3Hr1G070850.1	Barley	mitochondrion	68.47	12.2
TraesCS3D01G275500.1	Wheat	cytosol	72.07	11.59
KRH66385	Soybean	mitochondrion	27.93	4.98
KRH00689	Soybean	mitochondrion	25.23	4.67
KRH40505	Soybean	mitochondrion	25.23	4.66
KRH65116	Soybean	mitochondrion	25.23	4.64
KRH48207	Soybean	mitochondrion	25.23	4.64
KRH13473	Soybean	plastid	0.0	0.0
KRH01213	Soybean	cytosol, plastid	0.0	0.0

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:35.1	EMBL:ACUP02009430	EnsemblPlantsGene:GLYMA_15G204400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004471	GO:GO:0004473	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006090	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0051287	GO:GO:0055114
InterPro:IPR037062	UniProt:K7K0Z5	EnsemblPlants:KRH12915	ProteinID:KRH12915	ProteinID:KRH12915.1	InterPro:Malic_NAD-bd
InterPro:Malic_N_dom_sf	InterPro:NAD(P)-bd_dom_sf	PFAM:PF03949	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SUPFAM:SSF51735
UniParc:UPI00029570A1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:27108863..27109721

Molecular Weight (calculated)

12109.7 Da

IEP (calculated)

7.775

GRAVY (calculated)

0.120

Length

111 amino acids

Sequence
(BLAST)

001: MTVVKQNYGE KVLIEFEYFA NHNSFELLAK YGTTHLVQGT ASVVLAGVVA ALKLINGNLA NHTFLFLGAG EAGTGIAELI ALEMSKQTKT PIEETRKNIW
101: LVDSKVVEKK S

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.