Factsheet for GSMUA_AchrUn_randomP19370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07269	Soybean	cytosol	86.27	86.13
KRH74263	Soybean	cytosol	86.1	85.96
VIT_11s0016g03210.t01	Wine grape	cytosol	85.76	85.62
GSMUA_Achr7P13690_001	Banana	cytosol	82.37	84.52
KRH12915	Soybean	cytosol	15.42	81.98
Zm00001d012764_P001	Maize	cytosol	67.97	80.68
KRH60218	Soybean	mitochondrion	86.1	80.25
AT2G19900.1	Thale cress	cytosol	78.98	80.21
Os01t0743500-01	Rice	plasma membrane, plastid	78.98	79.66
Bra039029.1-P	Field mustard	cytosol	78.14	79.21
CDY35901	Canola	cytosol	77.46	78.52
EES01460	Sorghum	cytosol	77.8	77.4
KRH41507	Soybean	cytosol, peroxisome, plastid	73.56	77.36
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	74.07	76.94
GSMUA_Achr10P...	Banana	plastid	85.25	76.33
GSMUA_Achr3P31710_001	Banana	cytosol	84.24	76.23
TraesCS3B01G309300.1	Wheat	mitochondrion	78.14	74.24
CDX82748	Canola	cytosol	72.88	73.76
HORVU3Hr1G070850.1	Barley	mitochondrion	76.61	72.55
TraesCS3D01G275500.1	Wheat	cytosol	77.97	66.67
GSMUA_Achr1P00210_001	Banana	mitochondrion	41.69	40.73
GSMUA_Achr7P06830_001	Banana	mitochondrion	40.0	37.58

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG19370_001	EnsemblPlants:GSMUA_AchrUn_randomP19370_001	EnsemblPlants:GSMUA_AchrUn_randomT19370_001
InterPro:IPR037062	UniProt:M0UAJ6	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI0002951096	SEG:seg	:	:	:

Description

NADP-dependent malic enzyme [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19370_001]

Coordinates

chrchrUn_random:-:93123223..93130110

Molecular Weight (calculated)

64974.4 Da

IEP (calculated)

6.274

GRAVY (calculated)

-0.121

Length

590 amino acids

Sequence
(BLAST)

001: MESTLKELRA EGESVMKPRC TVAGGVEDAY GEDRATEEQL VTPWTVSVAS GYSLLRDPRF NKGLAFTEKE RDAHYIRGLL PPACITQELQ EKKLMNNIRQ
101: YQLPLQRYMA MMELEERNER LFYKLLIDNV EELLPIVYTP TVGEACQKYG SIFRRPQGLF ISLKEKGKIL EVLKNWPEKS IQVIVVTDGE RILGLGDLGC
201: QGMGIPVGKL ALYTALGGIR PSSCLPITID VGTNNENLLG DEFYIGLRQK RATGQEYAEL LHEFMTAVKQ NYGEKVLIQF EDFANHNAFE LLAKYGTTHL
301: VFNDDIQGTA SVVLAGLVAA LKLVGGTLAD QTFLFLGAGE AGTGIAELIA LQMSKESKVP LEETRRKIWL VDSKGLIVSS RKESLQHFKK PWAHEHEPVG
401: TLLDAVKAIK PTALIGSSGV GKTFTKEVVE AMASFNEKPI ILALSNPTSQ SECTAAEAYN WSKGQAIFAS GSPFDPVEYN GKTFVPGQAN NAYIFPGFGL
501: GLVISGAIRV HDDMLLAASE ALANQVTPEN FDKGLIYPPF SNIRTISAHI AANVAAKAYD LGLATRLPRP QNLVKYAESC MYTPVYRSYR

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.