Factsheet for GSMUA_Achr7P06830_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0021g00500.t01	Wine grape	mitochondrion	83.44	83.84
KRH66385	Soybean	mitochondrion	82.01	82.8
TraesCS2B01G256800.1	Wheat	mitochondrion, unclear	80.89	81.54
TraesCS2D01G234500.3	Wheat	mitochondrion	80.57	81.22
Zm00001d021546_P003	Maize	mitochondrion	79.94	81.1
TraesCS2A01G237000.1	Wheat	mitochondrion	80.41	81.06
KXG36268	Sorghum	mitochondrion	79.94	80.71
CDX81448	Canola	mitochondrion	79.3	80.58
Solyc08g013860.2.1	Tomato	plastid	80.25	80.51
CDY37211	Canola	mitochondrion	79.14	80.42
Os07t0496200-01	Rice	mitochondrion	79.62	80.39
Bra037210.1-P	Field mustard	mitochondrion	78.82	80.1
AT2G13560.1	Thale cress	mitochondrion	78.18	78.81
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	80.57	77.02
GSMUA_Achr1P00210_001	Banana	mitochondrion	63.53	66.06
GSMUA_Achr7P13690_001	Banana	cytosol	37.1	40.52
GSMUA_AchrUn_...	Banana	cytosol	37.58	40.0
GSMUA_Achr10P...	Banana	plastid	37.26	35.51
GSMUA_Achr3P31710_001	Banana	cytosol	36.78	35.43

Protein Annotations

MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006108	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0016491	GO:GO:0042803	GO:GO:0046872	GO:GO:0050897
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G06830_001	EnsemblPlants:GSMUA_Achr7P06830_001	EnsemblPlants:GSMUA_Achr7T06830_001	InterPro:IPR037062
UniProt:M0TFC3	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF53	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI000294AAE7	SEG:seg	:	:	:	:

Description

NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr7G06830_001]

Coordinates

chr7:-:4988102..5020216

Molecular Weight (calculated)

69884.4 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.165

Length

628 amino acids

Sequence
(BLAST)

001: MAISSSLPRL LRRTPSSLPL RWRLRMFLAG ERSRPFTTCE GSRPSIVHKR SLDILHDPWF NKGTAFSMTE RDRLDLRGLL PPNVMTPQQQ IDRFMVDLKR
101: LELNASDGPS DTNALAKWRI LNRLHDRNET MYYKVLIENI KEYAPIVYTP TVGRVCQNYS GLFRRPRGMY FSAADHGEMM SMVYNWPAEQ VDMIVVTDGS
201: RILGLGDLGV QGIGIAIGKL DLYVAAAGIN PQRVLPVMID VGTNNENLLQ DPLYLGLQEH RLDGEKYLSV IDEFMEAVFT RWPHVIVQFE DFQSKWAFKL
301: LQRYRSTYRM FNDDVQGTAG VAIAGLLGAV RAQGRPMIDF PKLKIVVAGA GSAGIGVLNA ARKTMARMLG NNEFAFEGAR SQFWVVDAMG LLTEGRMNID
401: PEALPFVRKL KESERHGLHE GASLAEVVTK VKPDVLLGLS AVGGLFSKEV LEALKDSSST RPAIFAMSNP TQNAECTPEE AFSTVGDHIV FASGSPFHDV
501: NLGNGKIGHC NQGNNMYLFP GIGLGTLLSG ARVISDGMLQ AAAQCLASYM KEEEVLNGII YPSISSIRDI TKEVAAAVVR EAVAEDLAEG YRDMDPQELQ
601: KLTQEETVAY VKKNMWEPHY PTLVYKRE

Best Arabidopsis Sequence Match ( AT2G13560.1 )
(BLAST)

001: MGIANKLRLS SSSLSRILHR RILYSSAVRS FTTSEGHRPT IVHKQGLDIL HDPWFNKGTA FTMTERNRLD LRGLLPPNVM DSEQQIFRFM TDLKRLEEQA
101: RDGPSDPNAL AKWRILNRLH DRNETMYYKV LINNIEEYAP IVYTPTVGLV CQNYSGLFRR PRGMYFSAED RGEMMSMVYN WPAEQVDMIV VTDGSRILGL
201: GDLGVHGIGI AVGKLDLYVA AAGINPQRVL PVMIDVGTNN EKLRNDPMYL GLQQRRLEDD DYIDVIDEFM EAVYTRWPHV IVQFEDFQSK WAFKLLQRYR
301: CTYRMFNDDV QGTAGVAIAG LLGAVRAQGR PMIDFPKMKI VVAGAGSAGI GVLNAARKTM ARMLGNTETA FDSAQSQFWV VDAQGLITEG RENIDPEAQP
401: FARKTKEMER QGLKEGATLV EVVREVKPDV LLGLSAVGGL FSKEVLEAMK GSTSTRPAIF AMSNPTKNAE CTPQDAFSIL GENMIFASGS PFKNVEFGNG
501: HVGHCNQGNN MYLFPGIGLG TLLSGAPIVS DGMLQAASEC LAAYMSEEEV LEGIIYPPIS RIRDITKRIA AAVIKEAIEE DLVEGYREMD AREIQKLDEE
601: GLMEYVENNM WNPEYPTLVY KDD

Arabidopsis Description

NAD-ME1NAD-dependent malic enzyme 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIU0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.