CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021546_P003	Maize	mitochondrion	98.23	98.71
Os07t0496200-01	Rice	mitochondrion	92.77	92.77
TraesCS2D01G234500.3	Wheat	mitochondrion	91.96	91.81
TraesCS2B01G256800.1	Wheat	mitochondrion, unclear	91.8	91.65
TraesCS2A01G237000.1	Wheat	mitochondrion	91.64	91.49
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	91.8	86.91
KRH66385	Soybean	mitochondrion	80.71	80.71
VIT_15s0021g00500.t01	Wine grape	mitochondrion	80.39	80.0
GSMUA_Achr7P06830_001	Banana	mitochondrion	80.71	79.94
Solyc08g013860.2.1	Tomato	plastid	79.26	78.75
Bra037210.1-P	Field mustard	mitochondrion	77.97	78.48
CDY37211	Canola	mitochondrion	77.97	78.48
CDX81448	Canola	mitochondrion	77.81	78.32
AT2G13560.1	Thale cress	mitochondrion	77.97	77.85
KXG38219	Sorghum	mitochondrion	63.34	63.75
OQU83656	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	13.34	44.15
EES19164	Sorghum	cytosol, peroxisome, plastid	38.26	41.75
EES01460	Sorghum	cytosol	38.1	39.97
KXG33287	Sorghum	cytosol	37.78	39.63
EES00150	Sorghum	plastid	38.59	37.74
KXG21798	Sorghum	plastid	38.26	36.5
OQU86165	Sorghum	mitochondrion	32.48	28.57

Protein Annotations

MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	UniProt:A0A1B6QED9	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	EnsemblPlants:KXG36268
ProteinID:KXG36268	ProteinID:KXG36268.1	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF53	SMART:SM00919	SMART:SM01274	EnsemblPlantsGene:SORBI_3002G309400
SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI00081ABDAF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:68352405..68360363

Molecular Weight (calculated)

69388.5 Da

IEP (calculated)

6.028

GRAVY (calculated)

-0.195

Length

622 amino acids

Sequence
(BLAST)

001: MASISRNLRR SLAPDRLRRL LLLSQHPREY VTAECHRPVV LHKRGPDILH DPWFNRGTAF SMTERDRLGL RGLLPPNVVS SQQQIDRFML DLKRLQRYAK
101: DGPSDTYPLA KWRILNRLHD RNETMYYKVL IDNIEEYAPI VYTPTVGLVC QNYSGLFRRP RGMYFSAEDR GEMMSMVYNW PADQVDMIVV TDGSRILGLG
201: DLGVHGIGIA IGKLDLYVAA AGINPQRVLP VMIDVGTNNE KLLKDPLYLG LQEHRLEGDE YVSVIDEFME AVFTRWPNVI VQFEDFQSKW AFRLLQRYRK
301: TYRMFNDDVQ GTAGVAIAGL LGAVRAQGRP MIDFPKQRIV VAGAGSAGIG VVNAASRTMA RMLGNNEVAF ESARSQFWIV DALGLITEDR EDIDPDARPF
401: ARRKSELGHQ GLSEGASLVE VVKKVKPDVI LGLSAVGGLF SEEVLEALKD SSSSRPAIFA MSNPTKNAEC TPGEAFSILG EKVIFASGSP FHDVDLGDGK
501: IGHSNQGNNM YLFPGIGLGT LLSGARVISD GMLQAAAERL ASYMKEEEVL EGIIYPPISR IRDITKEVAA AVVREAVAED LAEGYRDMDA HELARLSEEE
601: TIEYVKTNMW SPVYPTIIYK KD

Best Arabidopsis Sequence Match ( AT2G13560.1 )
(BLAST)

001: MGIANKLRLS SSSLSRILHR RILYSSAVRS FTTSEGHRPT IVHKQGLDIL HDPWFNKGTA FTMTERNRLD LRGLLPPNVM DSEQQIFRFM TDLKRLEEQA
101: RDGPSDPNAL AKWRILNRLH DRNETMYYKV LINNIEEYAP IVYTPTVGLV CQNYSGLFRR PRGMYFSAED RGEMMSMVYN WPAEQVDMIV VTDGSRILGL
201: GDLGVHGIGI AVGKLDLYVA AAGINPQRVL PVMIDVGTNN EKLRNDPMYL GLQQRRLEDD DYIDVIDEFM EAVYTRWPHV IVQFEDFQSK WAFKLLQRYR
301: CTYRMFNDDV QGTAGVAIAG LLGAVRAQGR PMIDFPKMKI VVAGAGSAGI GVLNAARKTM ARMLGNTETA FDSAQSQFWV VDAQGLITEG RENIDPEAQP
401: FARKTKEMER QGLKEGATLV EVVREVKPDV LLGLSAVGGL FSKEVLEAMK GSTSTRPAIF AMSNPTKNAE CTPQDAFSIL GENMIFASGS PFKNVEFGNG
501: HVGHCNQGNN MYLFPGIGLG TLLSGAPIVS DGMLQAASEC LAAYMSEEEV LEGIIYPPIS RIRDITKRIA AAVIKEAIEE DLVEGYREMD AREIQKLDEE
601: GLMEYVENNM WNPEYPTLVY KDD

Arabidopsis Description

NAD-ME1NAD-dependent malic enzyme 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIU0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.