CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G285900.2	Wheat	cytosol	93.42	93.27
Zm00001d043601_P003	Maize	mitochondrion	98.82	88.25
OQU83656	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	26.81	84.57
TraesCS3D01G285700.2	Wheat	plastid	93.76	84.11
TraesCS3B01G320200.1	Wheat	cytosol, peroxisome, plastid	89.38	83.07
Os01t0723400-04	Rice	plastid	88.36	81.49
Solyc05g050120.2.1	Tomato	plastid	79.43	81.35
PGSC0003DMT400084201	Potato	cytosol	79.26	81.17
EES19164	Sorghum	cytosol, peroxisome, plastid	77.74	80.88
PGSC0003DMT400000961	Potato	cytosol	78.92	79.46
Solyc12g008430.1.1	Tomato	plastid	78.58	79.12
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	93.76	78.64
EES01460	Sorghum	cytosol	76.56	76.56
KXG21798	Sorghum	plastid	76.56	69.63
EES00150	Sorghum	plastid	74.2	69.18
PGSC0003DMT400043836	Potato	cytosol	24.79	61.25
OQU86165	Sorghum	mitochondrion	66.27	55.59
KXG38219	Sorghum	mitochondrion	39.46	37.86
KXG36268	Sorghum	mitochondrion	39.63	37.78

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	UniProt:A0A1B6Q5U5	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	EnsemblPlants:KXG33287
ProteinID:KXG33287	ProteinID:KXG33287.1	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SMART:SM00919	SMART:SM01274	EnsemblPlantsGene:SORBI_3003G280900
SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0001C80A8A	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:61585619..61591072

Molecular Weight (calculated)

65555.6 Da

IEP (calculated)

5.718

GRAVY (calculated)

-0.181

Length

593 amino acids

Sequence
(BLAST)

001: MESTLKGIRG SDAPCVLDMD DAATVAGGVE DTYGEDRATE EQLVTPWTVS VASGYNLLRD PRYNKGLAFT ERERETHYLR GLLPPAIVSQ ELQERKIMNN
101: IRQYQLPLQR YMALMDLQEG NERLFYKLLI DNVEELLPIV YTPTVGEACQ KYGSIFSRPQ GLYISLKEKG KILEVLKNWP ERSIQVIVVT DGERILGLGD
201: LGCQGMGIPV GKLSLYTALG GVRPSACLPI TLDVGTNNEE LLNDEFYIGL RQRRATGQEY TDFLQEFMSA VKQNYGEKVL IQFEDFANHN AFDLLARYGT
301: THLVFNDDIQ GTASVVLAGL IAAQTLLGGS LADHTYLFLG AGEAGTGIAE LIALEISRQT KAPIEECRKK IWLVDSKGLI VSTRKESLQH FKKPWAHEHK
401: PVNNLLDAVN AIKPTVLIGT SGKGQTFTKD VIEAISSFNE RPIILALSNP TSQSECTAEQ AYTWSKGQAV FATGSPFDPV EYNGKIHVPG QANNAYIFPG
501: FGLGVVMSGA IRVHDDMLLA ASEALAQQVT EENFEKGLIY PPFSNIRKIS AHIAANVAAK AYELGLASRR PRPKDLVKFA ESCMYSPIYR NYR

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.