Factsheet for TraesCS3B01G320200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G285900.2	Wheat	cytosol	87.46	93.94
KXG33287	Sorghum	cytosol	83.07	89.38
Os01t0723400-04	Rice	plastid	85.74	85.07
TraesCS3D01G285700.2	Wheat	plastid	87.62	84.57
Zm00001d043601_P003	Maize	mitochondrion	82.92	79.67
HORVU3Hr1G068600.2	Barley	mitochondrion, plastid	87.62	79.07
TraesCS1B01G141700.1	Wheat	cytosol	70.38	78.77
PGSC0003DMT400084201	Potato	cytosol	70.06	77.2
Solyc05g050120.2.1	Tomato	plastid	70.06	77.2
PGSC0003DMT400000961	Potato	cytosol	70.38	76.23
TraesCS3B01G128000.1	Wheat	cytosol	69.91	75.47
Solyc12g008430.1.1	Tomato	plastid	69.44	75.21
TraesCS3B01G309300.1	Wheat	mitochondrion	67.55	69.4
VIT_16s0039g00580.t01	Wine grape	cytosol	5.17	64.71
PGSC0003DMT400043836	Potato	cytosol	22.57	60.0
VIT_00s0183g00140.t01	Wine grape	cytosol	7.21	58.97
VIT_00s0342g00030.t01	Wine grape	cytosol	5.64	58.06
VIT_16s0039g01050.t01	Wine grape	cytosol	5.64	57.14
VIT_00s0279g00080.t01	Wine grape	cytosol	12.38	55.24
VIT_16s0115g00440.t01	Wine grape	cytosol	12.23	54.55
TraesCS1B01G190400.5	Wheat	mitochondrion	36.05	37.46
TraesCS2B01G256800.1	Wheat	mitochondrion, unclear	36.05	36.92

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287
GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF36	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS3B01G320200	EnsemblPlants:TraesCS3B01G320200.1	TIGR:cd05312	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:519057418..519062491

Molecular Weight (calculated)

70393.7 Da

IEP (calculated)

6.247

GRAVY (calculated)

-0.080

Length

638 amino acids

Sequence
(BLAST)

001: MESTMKEIRG VGAPCVLDMD DAATVGGGVE DTYGEDRATE EQFVTPWTVS VASGYNLLRD PRYNKGLAFT EKERETHYLR GLLPPAVTSQ ELQERKIMHN
101: IRQYQLPLQR YMAMMDLQER NERLFYKLLI DNVEELLPIV YTPTVGEACQ KYGSIYSRPQ GLYISLKEKG KILEVLKNWP ERSIQVIVVT DGERILGLGD
201: LGCQGMGIPV GKLSLYTALG GVRPSACLPI TLDVGTNNEE LLNDEFYIGL RQKRATGQEY ADFLHEFMAA VKQNYGEKVL IQFEDFANHN AFDLLARYGT
301: THLVFNDDIQ GTASVVLAGL VAALKLVGGT LAEHTYLFLG AGEAGTGIAE LIALEMSRQT KTPIDECRKK IWLVDSKGLI VSARKESLQH FKKPWAHEHE
401: HVRNLLDAVN AIKPTVLIGT SGKGQTFTQE VVEAISSFNE MPIILALSNP TSQAECTAEQ AYTWSKGRAV FATGSPFDPV EYNGKIHVPG QANNAYIFPG
501: FGLGVVMSGA IRVHDDMLLA ASEALAQQVT QENFDKGLIY PPFSNIRKIS AHIAANVAAK VWRVGALGRR TWSSMQRAAC TARFTAITGE SAFIRLCTET
601: VCPTTCFKIP EEHHLWLSCA TGVGSSFVSY LLPVLPIL

Best Arabidopsis Sequence Match ( AT5G25880.2 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.