CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG24799

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G00570.1	KXG24799	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0503500-01	Rice	mitochondrion	91.42	91.13
Zm00001d013911_P001	Maize	mitochondrion	94.17	90.94
TraesCS1D01G164800.4	Wheat	mitochondrion, unclear	90.45	90.6
TraesCS1B01G190400.5	Wheat	mitochondrion	87.54	88.11
GSMUA_Achr1P00210_001	Banana	mitochondrion	77.18	78.97
VIT_15s0046g03670.t01	Wine grape	mitochondrion	77.18	78.84
Solyc01g094200.2.1	Tomato	plastid	76.05	78.2
HORVU1Hr1G045720.1	Barley	plastid	90.78	77.17
Bra037347.1-P	Field mustard	mitochondrion	72.98	76.83
KRH48207	Soybean	mitochondrion	74.92	76.66
KRH65116	Soybean	mitochondrion	74.92	76.66
CDY51151	Canola	mitochondrion	74.92	76.28
CDY68746	Canola	mitochondrion	74.6	76.2
KRH00689	Soybean	mitochondrion	73.79	76.0
CDX74340	Canola	mitochondrion	74.6	75.82
CDY07209	Canola	mitochondrion	74.6	75.7
PGSC0003DMT400000066	Potato	mitochondrion	76.21	75.12
KRH40505	Soybean	mitochondrion	72.98	75.04
Bra000967.1-P	Field mustard	mitochondrion	74.6	74.35
AT4G00570.1	Thale cress	mitochondrion	72.82	74.14
KXG36268	Sorghum	mitochondrion	63.75	63.34
OQU83656	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	13.59	44.68
EES19164	Sorghum	cytosol, peroxisome, plastid	38.51	41.75
KXG33287	Sorghum	cytosol	37.86	39.46
EES01460	Sorghum	cytosol	37.86	39.46
KXG21798	Sorghum	plastid	39.16	37.12
EES00150	Sorghum	plastid	38.19	37.11
OQU86165	Sorghum	mitochondrion	33.01	28.85

Protein Annotations

MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	UniProt:A0A1B6QJZ5	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	EnsemblPlants:KXG38219
ProteinID:KXG38219	ProteinID:KXG38219.1	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF32	SMART:SM00919	SMART:SM01274	EnsemblPlantsGene:SORBI_3001G201700
SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI00081AB977	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:18302412..18308518

Molecular Weight (calculated)

67864.9 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.133

Length

618 amino acids

Sequence
(BLAST)

001: MISPAMWRSA ARRSSQVRRL LSSSAPPAPA GAAVPGPCIV HKRGNDILHD PWYNKDTAFP MTERDRLGLR GLLPPRVMSF EQQYERFINS FRSLEHNTRG
101: EPDSIVALAK WRILNRLHDR NETLYYRVLI DNIKDFAPII YTPTVGLVCE NYSGLFRRPR GMYFSAKDKG EMMSMIYNWP AEKVDMIVVT DGSRILGLGD
201: LGVQGIGIPI GKLDVYVAAA GINPQKVLPI MLDVGTNNQK LLEDKLYLGL RQPRLEGEEY LAVVDEFMEA VHARWPKAVV QFEDFQMKWA FETLQRYRNR
301: FCMFNDDVQG TAGVALAGLL GAVRAQGRPL QDFTNQKIVV VGAGSAGIGV LSMAKQAMLR MPGIHRTGEG HNQFWVLDKD GLITKARKDL DSAVARFARG
401: FGPDEVPDLH EGASLVEVVK KVKPHVLLGL SGVGGIFNEE VLKAMKESDS PRPAVFAMSN PTTKAECTPD DVFKHVGENA IFASGSPFSN VSLGNGKAGY
501: ANQANNMYLF PGIGLGALLS GARHISDGML QAAAECLASY ITDDEIRKGI LFPSVSSIRH ITARVGAAVV RAAVAEDLAE GCCDVGPREL GSMSESESVD
601: YVARKMWYPI YSPLVSDK

Best Arabidopsis Sequence Match ( AT4G00570.1 )
(BLAST)

001: MMWKNIAGLS KAAAAARTHG SRRCFSTAIP GPCIVHKRGA DILHDPWFNK DTGFPLTERD RLGIRGLLPP RVMTCVQQCD RFIESFRSLE NNTKGEPENV
101: VALAKWRMLN RLHDRNETLY YRVLIDNIKD FAPIIYTPTV GLVCQNYSGL YRRPRGMYFS AKDKGEMMSM IYNWPAPQVD MIVITDGSRI LGLGDLGVQG
201: IGIPIGKLDM YVAAAGINPQ RVLPIMLDVG TNNEKLLQND LYLGVRQPRL EGEEYLEIID EFMEAAFTRW PKAVVQFEDF QAKWAFGTLE RYRKKFCMFN
301: DDVQGTAGVA LAGLLGTVRA QGRPISDFVN QKIVVVGAGS AGLGVTKMAV QAVARMAGIS ESEATKNFYL IDKDGLVTTE RTKLDPGAVL FAKNPAEIRE
401: GASIVEVVKK VRPHVLLGLS GVGGIFNEEV LKAMRESDSC KPAIFAMSNP TLNAECTAAD AFKHAGGNIV FASGSPFENV ELENGKVGHV NQANNMYLFP
501: GIGLGTLLSG ARIVTDGMLQ AASECLASYM TDEEVQKGIL YPSINNIRHI TAEVGAAVLR AAVTDDIAEG HGDVGPKDLS HMSKEDTVNY ITRNMWFPVY
601: SPLVHEK

Arabidopsis Description

NAD-ME2NAD-dependent malic enzyme 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7K9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.