Factsheet for TraesCS2D01G234500.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G256800.1	Wheat	mitochondrion, unclear	99.52	99.52
TraesCS2A01G237000.1	Wheat	mitochondrion	99.2	99.2
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	98.88	93.76
Zm00001d021546_P003	Maize	mitochondrion	91.81	92.41
KXG36268	Sorghum	mitochondrion	91.81	91.96
Os07t0496200-01	Rice	mitochondrion	91.33	91.48
GSMUA_Achr7P06830_001	Banana	mitochondrion	81.22	80.57
VIT_15s0021g00500.t01	Wine grape	mitochondrion	80.74	80.48
KRH66385	Soybean	mitochondrion	80.26	80.39
Solyc08g013860.2.1	Tomato	plastid	78.97	78.59
CDY37211	Canola	mitochondrion	77.85	78.48
Bra037210.1-P	Field mustard	mitochondrion	77.85	78.48
CDX81448	Canola	mitochondrion	77.69	78.32
AT2G13560.1	Thale cress	mitochondrion	77.21	77.21
TraesCS1D01G164800.4	Wheat	mitochondrion, unclear	63.56	64.18
TraesCS1D01G123400.2	Wheat	mitochondrion	39.33	42.76
TraesCS3D01G110700.1	Wheat	plastid	39.0	37.85
TraesCS3D01G285700.2	Wheat	plastid	37.72	35.55
TraesCS3D01G275500.1	Wheat	cytosol	37.88	34.2

Protein Annotations

MapMan:2.3.9	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf
InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106
PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF53	SMART:SM00919	SMART:SM01274
SUPFAM:SSF51735	SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS2D01G234500	EnsemblPlants:TraesCS2D01G234500.3	TIGR:cd05312	SEG:seg

Description

No Description!

Coordinates

chr2D:-:215838662..215847385

Molecular Weight (calculated)

69291.2 Da

IEP (calculated)

5.770

GRAVY (calculated)

-0.213

Length

623 amino acids

Sequence
(BLAST)

001: MANASSISRS LRRSLAPDAL HRLLLQRSRA FVTAECHRPV VLHKRGPDIL HDPWFNRGTA FSMTERDRLG LRGLLPPSVV SSQQQIDRFM GDLKRLEQNA
101: RDGPSDTYQL AKWRILNRLH DRNETMYYKV LIDNIEEYAP IVYTLTVGAV CQNYSGLFRR PRGMYFSAED RGEMMSMVYN WPADQVDMIV VTDGSRILGL
201: GDLGVQGIGI AIGKLDLYVA AAGINPQRVL PVMIDVGTNN EKLLKDPLYL GLQEHRLEGE EYVEIIDEFM EAVFSRWPNV IVQFEDFQSK WAFRLLQRYR
301: KTYRMFNDDV QGTAGVAIAG LLGAVRAQGR PMIDFPKQKI VVAGAGSAGI GVVNAASRTM ARMLGNNEVA FESARSQFWI VDAHGLITEE RVDIDPDARP
401: FARRKSELTH QGLNEGASLI EVVKKVKPDV ILGLSAVGGL FSKEVLEALK DSSSSRPAIF AMSNPTKNAE CTPEEAFSII GEKVVFSSGS PFDDVDLGDG
501: KIGHSNQGNN MYLFPGIGLG TLLSGARIVS DGMLQAAAER LASYMKEEEV LQGIIYPPTS RIRDITKEVA AAVVREAVAE DLAEGYRDMD ARELARLSEE
601: ETVDYVKNNM WNPVYPTVVY KKD

Best Arabidopsis Sequence Match ( AT2G13560.1 )
(BLAST)

001: MGIANKLRLS SSSLSRILHR RILYSSAVRS FTTSEGHRPT IVHKQGLDIL HDPWFNKGTA FTMTERNRLD LRGLLPPNVM DSEQQIFRFM TDLKRLEEQA
101: RDGPSDPNAL AKWRILNRLH DRNETMYYKV LINNIEEYAP IVYTPTVGLV CQNYSGLFRR PRGMYFSAED RGEMMSMVYN WPAEQVDMIV VTDGSRILGL
201: GDLGVHGIGI AVGKLDLYVA AAGINPQRVL PVMIDVGTNN EKLRNDPMYL GLQQRRLEDD DYIDVIDEFM EAVYTRWPHV IVQFEDFQSK WAFKLLQRYR
301: CTYRMFNDDV QGTAGVAIAG LLGAVRAQGR PMIDFPKMKI VVAGAGSAGI GVLNAARKTM ARMLGNTETA FDSAQSQFWV VDAQGLITEG RENIDPEAQP
401: FARKTKEMER QGLKEGATLV EVVREVKPDV LLGLSAVGGL FSKEVLEAMK GSTSTRPAIF AMSNPTKNAE CTPQDAFSIL GENMIFASGS PFKNVEFGNG
501: HVGHCNQGNN MYLFPGIGLG TLLSGAPIVS DGMLQAASEC LAAYMSEEEV LEGIIYPPIS RIRDITKRIA AAVIKEAIEE DLVEGYREMD AREIQKLDEE
601: GLMEYVENNM WNPEYPTLVY KDD

Arabidopsis Description

NAD-ME1NAD-dependent malic enzyme 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIU0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.