Factsheet for TraesCS3D01G275500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G309300.1	Wheat	mitochondrion	87.97	97.75
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	78.84	95.77
HORVU3Hr1G070850.1	Barley	mitochondrion	85.22	94.38
Os01t0743500-01	Rice	plasma membrane, plastid	76.81	90.6
Zm00001d012764_P001	Maize	cytosol	63.33	87.93
EES01460	Sorghum	cytosol	75.07	87.35
GSMUA_AchrUn_...	Banana	cytosol	66.67	77.97
VIT_11s0016g03210.t01	Wine grape	cytosol	66.09	77.16
AT2G19900.1	Thale cress	cytosol	64.93	77.11
KRH74263	Soybean	cytosol	65.07	75.97
KRH07269	Soybean	cytosol	65.07	75.97
Bra039029.1-P	Field mustard	cytosol	63.19	74.91
CDY35901	Canola	cytosol	62.61	74.23
TraesCS1D01G123400.2	Wheat	mitochondrion	60.87	73.3
KRH12915	Soybean	cytosol	11.59	72.07
KRH60218	Soybean	mitochondrion	65.65	71.56
TraesCS3D01G110700.1	Wheat	plastid	65.07	69.94
TraesCS3D01G285700.2	Wheat	plastid	66.23	69.14
CDX82748	Canola	cytosol	58.41	69.13
KRH41507	Soybean	cytosol, peroxisome, plastid	55.65	68.45
TraesCS1D01G164800.4	Wheat	mitochondrion, unclear	34.35	38.41
TraesCS2D01G234500.3	Wheat	mitochondrion	34.2	37.88

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287
GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF35	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS3D01G275500	EnsemblPlants:TraesCS3D01G275500.1	TIGR:cd05312	SEG:seg	:

Description

No Description!

Coordinates

chr3D:-:381990863..381995438

Molecular Weight (calculated)

75743.3 Da

IEP (calculated)

8.754

GRAVY (calculated)

-0.137

Length

690 amino acids

Sequence
(BLAST)

001: MVNILRIVRL GTAELLEPAY RGGTCRGLSR DVSPDKRRRY HRVFAVRRTA LCWCFSSSPP PSGAPFMRGL RRSSLARIAS TTRAASARQC SSSILGGARA
101: APYCTMAGRS GEEADAAMAG VATGGVEDAY GEDRATEDQP VTPWAVCIAS GHSLLRDPRH NKGLSFTEKE RDAHYLRGLL PPVVLSQELQ EKRLLQNVRQ
201: LDVPLQRYMF LMDLQERNER LFYKLMIDNV EELLPVVYTP TVGEACQKYG SIFRRSQGLY ISLKDKGRVL EVLRNWPEKS IQVIVVTDGE RILGLGDLGC
301: QGMGIPVGKL ALYTALGGVR PSACLPITID VGTNNEELLN DEFYIGLRQK RATGQEYTEL LDEFMVAVKQ NYGQKVLVQF EDFANHNAFT LLEKYKATHL
401: VFNDDIQGTA AVVLAGLMAG LKFAGGTLAD HTFLFFGAGE AGTGIAELVA LEISMQSKTS QEEARKNIWL VDSKGLIVSS RKDSIQPFKK LYAHEHEPVK
501: DLLSAIKDIK PTALIGSAGV GQSFTKEVIE AMSSINKRPI ILALSNPTSK SECTAEQAYS WSQGRAIFGS GSPFDPVKYN DKLFVPAQAN NAYIFPGFGL
601: GVVTSGAIRV KDDMVLAAAE ALAEQVTAEH FDKGLIYPPF SSIRKISANI AARVAVKAYD LGLASHLPRP KDLVKYAESC MYSPIYRSYR

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.