Factsheet for GSMUA_Achr7P13690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g03210.t01	Wine grape	cytosol	85.22	82.91
GSMUA_AchrUn_...	Banana	cytosol	84.52	82.37
GSMUA_Achr10P...	Banana	plastid	92.0	80.27
KRH07269	Soybean	cytosol	81.74	79.53
KRH74263	Soybean	cytosol	81.74	79.53
KRH60218	Soybean	mitochondrion	83.83	76.15
AT2G19900.1	Thale cress	cytosol	76.7	75.9
Bra039029.1-P	Field mustard	cytosol	76.17	75.26
KRH12915	Soybean	cytosol	14.43	74.77
CDY35901	Canola	cytosol	75.48	74.57
KRH41507	Soybean	cytosol, peroxisome, plastid	71.3	73.08
GSMUA_Achr3P31710_001	Banana	cytosol	81.91	72.24
CDX82748	Canola	cytosol	70.61	69.64
GSMUA_Achr1P00210_001	Banana	mitochondrion	42.09	40.07
GSMUA_Achr7P06830_001	Banana	mitochondrion	40.52	37.1

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G13690_001	EnsemblPlants:GSMUA_Achr7P13690_001	EnsemblPlants:GSMUA_Achr7T13690_001
InterPro:IPR037062	UniProt:M0THA6	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF39	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI000296162E	SEG:seg	:	:	:

Description

NADP-dependent malic enzyme [Source:GMGC_GENE;Acc:GSMUA_Achr7G13690_001]

Coordinates

chr7:+:11006997..11012292

Molecular Weight (calculated)

63716.7 Da

IEP (calculated)

6.118

GRAVY (calculated)

-0.116

Length

575 amino acids

Sequence
(BLAST)

001: MDPKATVGGG VEDAYGEDRA TEEQLVTPWT FSVASGYNLL RDPHHNKGLA FTEKERDAHY LRGLLPPIVV SQELQERKLM SSLRQYKVPL QRYVAMVDLQ
101: ERNERLFFKL LIDNVEELLP VVYTPTVGEA CQKYGSIFRR PQGLYISLKE KGKILEVLKN WPVWSVQVIV VTDGERILGL GDLGCQGMGI PVGKLALYTA
201: LGGLRPSACL PITIDVGTNN EQLLNDEFYI GLRQRRARGQ EYDDLLHEFM CAVKQQYGEK VLVQFEDFAN HNAFDLLTRY SKTHLVFNDD IQGTASVVLA
301: GLVAVLKLVG GTLADHTYLF LGAGEAGTGI AELIALEMSR QTGTPIEQNR EKIWLVDSKG LIVSSRLESL QHFKKPWAHD HEPVNNLLDA VQVIKPSVLI
401: GTSGVGKTFT QDVVETMASF NEKPVILALS NPTSQSECTA EEAYTWTKGR AIFASGSPFD PVEYEGKTFV PGQANNAYIF PGLGLGLVIS GAIRVHDEML
501: LAASEALAQQ VTQENFDKGL IYPPFKSIRK ISAHIAASVA AKVYELGLAT RLPRPENLVK YAESCMYTPA YRCYR

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.