CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88203	Canola	cytosol	76.74	72.96
CDX80544	Canola	cytosol	76.74	72.96
AT5G25880.1	Thale cress	cytosol	74.42	70.75
CDX91199	Canola	cytosol	73.52	69.9
CDY61446	Canola	cytosol	73.35	69.73
CDX70409	Canola	cytosol	71.56	68.03
CDX78432	Canola	cytosol	71.56	68.03
Os05t0186300-01	Rice	cytosol, plasma membrane	66.37	65.09
VIT_04s0008g00180.t01	Wine grape	cytosol	67.44	64.44
EES19164	Sorghum	cytosol, peroxisome, plastid	64.94	63.68
PGSC0003DMT400077452	Potato	cytosol	67.08	63.45
Zm00001d037693_P003	Maize	extracellular	64.58	63.33
Solyc08g066360.2.1	Tomato	nucleus, plastid, unclear	66.91	63.28
TraesCS1A01G122500.1	Wheat	cytosol	64.22	62.98
TraesCS1B01G141700.1	Wheat	cytosol	64.04	62.81
Zm00001d010358_P001	Maize	cytosol	63.51	62.28
Zm00001d036873_P001	Maize	cytosol	5.55	62.0
TraesCS1D01G123400.2	Wheat	mitochondrion	63.33	61.78
KRH62099	Soybean	mitochondrion	67.08	60.29
KRH52781	Soybean	mitochondrion	66.73	60.26
TraesCS3B01G128000.1	Wheat	cytosol	62.61	59.22
HORVU1Hr1G028030.16	Barley	mitochondrion	64.94	59.12
CDY35901	Canola	cytosol	61.36	58.93
VIT_02s0012g02460.t01	Wine grape	endoplasmic reticulum, plasma membrane	45.26	58.56
Zm00001d037961_P004	Maize	plastid	63.86	55.43
CDX82748	Canola	cytosol	57.78	55.4
Os01t0188400-01	Rice	plastid	63.33	55.4
Os02t0665000-01	Rice	cytosol	18.43	55.38
Zm00001d037962_P003	Maize	plastid	63.69	55.28
KXG21798	Sorghum	plastid	64.04	54.91
TraesCS3D01G110700.1	Wheat	plastid	62.79	54.67
CDX68115	Canola	plastid	63.69	54.52
Zm00001d000316_P001	Maize	plastid	58.5	54.23
TraesCS3A01G108900.1	Wheat	golgi	62.79	54.17
EES00150	Sorghum	plastid	61.54	54.09
CDX85926	Canola	plastid	60.64	54.07
Zm00001d034292_P001	Maize	cytosol	25.22	51.46
CDY33808	Canola	endoplasmic reticulum, extracellular	3.22	51.43
HORVU3Hr1G019790.9	Barley	plastid	63.33	48.56
OQU86165	Sorghum	mitochondrion	53.67	42.43
HORVU5Hr1G018620.1	Barley	cytosol	7.33	35.34
CDY37211	Canola	mitochondrion	35.24	31.88
CDX81448	Canola	mitochondrion	35.24	31.88
CDY68746	Canola	mitochondrion	32.92	30.41
CDX74340	Canola	mitochondrion	32.92	30.26
CDY51151	Canola	mitochondrion	32.74	30.15
CDY07209	Canola	mitochondrion	32.74	30.05
Zm00001d003090_P001	Maize	mitochondrion	13.6	22.29
HORVU3Hr1G102340.13	Barley	plastid	8.23	19.17
Zm00001d051182_P001	Maize	cytosol	6.08	15.38

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:A0A078ELK8	EnsemblPlants:CDY02046	ProteinID:CDY02046
ProteinID:CDY02046.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00113392001
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	PANTHER:PTHR23406	PANTHER:PTHR23406:SF36
SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0004EDE771	SEG:seg

Description

BnaC04g14550D

Coordinates

chrLK031931:-:801195..804501

Molecular Weight (calculated)

62542.9 Da

IEP (calculated)

10.211

GRAVY (calculated)

-0.216

Length

559 amino acids

Sequence
(BLAST)

001: MKKRRRTVAP RKVRRKGQTW RNNYRRSNNA HRARGRQMQH YRNHNRGGFL PSVKIALIQG TKGRQSQHYM NHNRGGFFPS PSKEKKMMHN LRQYIVPLHR
101: EEREIVLQAL IDKLLPVVYT PTVGEACQKY GSIFRRPQGL YISLKEKGKI LEVLKNWPQR RIQVIVVTDG ERILGLGDLG MGIPVGKLFL YTALEGIRPS
201: ACLPITIDVG TDSEKLLNDE FYIGLKQKRA NRQGLLLSFI LLSTRLEYTE FLHEFMCAVK QNYGEKVLVQ FEGFANHHAF ELFSKYYSSH LVLNDDIQGT
301: ASMVLAGLIA AQKVLGKSLA DHTFLFLGAG EAGTGIAELI ALKISKETGT PIDETRKKIW LVDSKGLIVS SHKESLQHFK QPWAHDHEPV NELLRAANAI
401: KPTVLIGTSG VGKTFTKEVV EAMATFNETP LILALSNPTS QAECTAKQAY TWTQGRAIFA SGSPFDPVEY EGKTFFPGQV RFVVYSLGLG FIMSVAIRVR
501: DDVLLAASEA LASQVTEENF ADRLIYPPFT NIRKISANIA ASVGAKTYEL GLAIEPASS

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.