Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0218200-00 | |
| Os05t0210600-01 | |
| Os05t0587300-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G11670.1 | Os01t0218200-00 | AT2G42580.1 | 19000166 |
| AT5G11670.1 | Os05t0210600-01 | AT2G42580.1 | 19000166 |
| AT5G11670.1 | Os05t0587300-01 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034292_P001 | Maize | cytosol | 51.08 | 34.67 |
| VIT_02s0012g02460.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 54.3 | 23.38 |
| Os05t0186300-01 | Rice | cytosol, plasma membrane | 69.35 | 22.63 |
| VIT_04s0008g00180.t01 | Wine grape | cytosol | 67.74 | 21.54 |
| Solyc08g066360.2.1 | Tomato | nucleus, plastid, unclear | 66.67 | 20.98 |
| AT5G25880.1 | Thale cress | cytosol | 66.13 | 20.92 |
| CDX80544 | Canola | cytosol | 65.59 | 20.75 |
| CDX88203 | Canola | cytosol | 65.59 | 20.75 |
| Bra009866.1-P | Field mustard | cytosol | 65.59 | 20.75 |
| CDX91199 | Canola | cytosol | 64.52 | 20.41 |
| KRH62099 | Soybean | mitochondrion | 67.74 | 20.26 |
| CDY61446 | Canola | cytosol | 63.98 | 20.24 |
| Bra023336.1-P | Field mustard | cytosol | 63.98 | 20.24 |
| KRH52781 | Soybean | mitochondrion | 67.2 | 20.19 |
| Os01t0743500-01 | Rice | plasma membrane, plastid | 63.44 | 20.17 |
| AT5G11670.1 | Thale cress | cytosol | 63.44 | 20.07 |
| CDX78432 | Canola | cytosol | 63.44 | 20.07 |
| Bra006107.1-P | Field mustard | cytosol | 63.44 | 20.07 |
| CDX70409 | Canola | cytosol | 63.44 | 20.07 |
| Os01t0723400-04 | Rice | plastid | 65.05 | 18.82 |
| Os01t0188400-01 | Rice | plastid | 64.52 | 18.78 |
| CDY02046 | Canola | mitochondrion | 55.38 | 18.43 |
| HORVU3Hr1G102340.13 | Barley | plastid | 23.12 | 17.92 |
| Os07t0496200-01 | Rice | mitochondrion | 40.32 | 12.06 |
| Os10t0503500-01 | Rice | mitochondrion | 38.71 | 11.61 |
Protein Annotations
| Gene3D:1.20.1370.30 | Gene3D:3.40.50.10380 | EntrezGene:4330239 | MapMan:50.1.1 | UniProt:A3A9W6 | EMBL:AK068078 |
| ProteinID:BAS80175.1 | ProteinID:EAZ24105.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004470 | GO:GO:0004471 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR037062 | InterPro:Malic_N_dom | InterPro:Malic_N_dom_sf |
| InterPro:Malic_OxRdtase | EnsemblPlantsGene:Os02g0665000 | EnsemblPlants:Os02t0665000-01 | PFAM:PF00390 | PRINTS:PR00072 | PANTHER:PTHR23406 |
| PANTHER:PTHR23406:SF37 | SMART:SM01274 | SUPFAM:SSF53223 | UniParc:UPI0000F176A8 | RefSeq:XP_015626992.1 | RefSeq:XP_015626993.1 |
| RefSeq:XP_015626994.1 | RefSeq:XP_015626995.1 | RefSeq:XP_015626996.1 | RefSeq:XP_015626997.1 | : | : |
Description
Similar to Malic enzyme. (Os02t0665000-01);Similar to NADP-malic enzyme. (Os02t0665000-02)
Coordinates
chr2:-:26988679..26993982
Molecular Weight (calculated)
20399.2 Da
IEP (calculated)
9.471
GRAVY (calculated)
0.204
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKGERSERL FYKLLIDNVE ELLPVVYTPT VGEACQKYGS IYRRPQGLYI SLKDKGKILE VLKNWPERSI QVIVITDGER ILGLGDLGCQ GMGIPVGKLS
101: LYTALGGVRA PCLHLHPSAT IIAAITSVLA PSLTHRFPLR FALSPLRVAS LHPHRIAPLI IPSWVTSFHI AASSGFVCSR PLADHP
101: LYTALGGVRA PCLHLHPSAT IIAAITSVLA PSLTHRFPLR FALSPLRVAS LHPHRIAPLI IPSWVTSFHI AASSGFVCSR PLADHP
001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R
Arabidopsis Description
NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.