Factsheet for PGSC0003DMT400008389

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
plastid 3
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036873_P001	Maize	cytosol	9.43	50.0
PGSC0003DMT400043836	Potato	cytosol	25.28	27.92
PGSC0003DMT400000961	Potato	cytosol	57.74	25.98
PGSC0003DMT400084201	Potato	cytosol	53.21	24.35
TraesCS3B01G128000.1	Wheat	cytosol	52.45	23.52
PGSC0003DMT400077452	Potato	cytosol	51.7	23.18
TraesCS3D01G110700.1	Wheat	plastid	52.45	21.65
KXG21798	Sorghum	plastid	52.45	21.32
TraesCS3A01G108900.1	Wheat	golgi	52.08	21.3
Os01t0188400-01	Rice	plastid	51.32	21.28
PGSC0003DMT400068027	Potato	plastid	50.94	21.09
EES00150	Sorghum	plastid	50.19	20.91
PGSC0003DMT400006726	Potato	plastid	50.19	20.72
HORVU3Hr1G019790.9	Barley	plastid	52.45	19.07
OQU86165	Sorghum	mitochondrion	44.91	16.83
Zm00001d003090_P001	Maize	mitochondrion	18.87	14.66
PGSC0003DMT400000066	Potato	mitochondrion	31.32	13.24
Zm00001d051182_P001	Maize	cytosol	7.17	8.6

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.90.230.10	MapMan:50.1.1	InterPro:Creatinase/aminopeptidase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004177	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0005575
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008235	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062
UniProt:M0ZUH6	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00390	PFAM:PF00557	PFAM:PF03949	EnsemblPlantsGene:PGSC0003DMG400003238	PGSC:PGSC0003DMG400003238	EnsemblPlants:PGSC0003DMT400008389
PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00680	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	InterPro:Pept_M24
InterPro:Pept_M24A_MAP1	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223	SUPFAM:SSF55920	TMHMM:TMhelix
UniParc:UPI0002949040	SEG:seg	:	:	:	:

Description

Malic enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG400003238]

Coordinates

chr10:+:14168481..14172175

Molecular Weight (calculated)

29300.8 Da

IEP (calculated)

8.358

GRAVY (calculated)

0.183

Length

265 amino acids

Sequence
(BLAST)

001: MRRMSNPVMN YIILSQGMGI PVGKLALYTV FGGVRPSACV PITIDVGTNN EQLLKDKFYI GLRQKRATGE EYYNFLEEFM KVVKQIYGEK VLVQYEDFAN
101: HDAFELLVKY GTTHLGTAVV VLAGLVASLK LLGWSLVEHT FLFFGAGEAG TGIAEIIALA ISKKGYHGDT SKTFFCGDVS ESIKRLVKVT EECLHYGSAV
201: CRDGALYRKI GKRISEHAEK FGYGVVDRFV GHGIGTVFHS EPLIFHHHRF TFGGVGCVCP VLTFL

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.