CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005347_P001	Maize	peroxisome, plasma membrane	98.16	98.16
Os09t0567300-01	Rice	plasma membrane	94.25	94.25
TraesCS4B01G010500.1	Wheat	golgi	87.59	87.59
TraesCS4A01G303300.1	Wheat	golgi	87.36	87.36
TraesCS4D01G009200.1	Wheat	golgi	87.13	87.13
EES15190	Sorghum	golgi	83.45	83.83
GSMUA_Achr1P17030_001	Banana	cytosol, mitochondrion, peroxisome	82.76	82.95
GSMUA_Achr2P20300_001	Banana	extracellular	81.61	81.8
VIT_08s0007g03610.t01	Wine grape	extracellular	80.23	80.41
Solyc09g009390.2.1	Tomato	extracellular	78.62	78.98
KRH32676	Soybean	endoplasmic reticulum, extracellular, nucleus	78.16	78.52
PGSC0003DMT400007000	Potato	cytosol	77.93	78.29
KRH30834	Soybean	nucleus	77.93	78.29
CDY13340	Canola	peroxisome	77.7	77.88
Bra006954.1-P	Field mustard	peroxisome	77.7	77.88
CDX78130	Canola	peroxisome	77.47	77.65
CDX73597	Canola	peroxisome	77.47	77.65
AT5G03630.1	Thale cress	peroxisome	72.87	72.87
CDY11263	Canola	peroxisome	71.72	71.72
AT3G52880.2	Thale cress	extracellular, vacuole	76.55	71.46
CDX80881	Canola	peroxisome	71.26	71.26
Bra005775.1-P	Field mustard	cytosol	70.8	70.8
AT3G09940.1	Thale cress	cytosol	62.99	62.13
CDY07945	Canola	peroxisome	57.7	56.53
Bra001293.1-P	Field mustard	cytosol	51.26	56.46
CDX74001	Canola	cytosol	51.03	56.35
EES05650	Sorghum	plasma membrane	54.25	49.58
OQU85544	Sorghum	extracellular	50.34	44.6
KXG24413	Sorghum	mitochondrion, plastid	45.29	39.09
KXG28119	Sorghum	cytosol	8.74	29.23
OQU91530	Sorghum	cytosol	4.6	20.41

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	UniProt:A0A1B6QB11	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016656	GO:GO:0050660	GO:GO:0055114
GO:GO:0098869	InterPro:IPR016156	InterPro:IPR036188	EnsemblPlants:KXG35115	ProteinID:KXG35115	ProteinID:KXG35115.1
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF3	EnsemblPlantsGene:SORBI_3002G133800
SUPFAM:SSF51905	SUPFAM:SSF55424	UniParc:UPI0001C80E27	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:19785610..19790294

Molecular Weight (calculated)

46776.9 Da

IEP (calculated)

5.241

GRAVY (calculated)

-0.066

Length

435 amino acids

Sequence
(BLAST)

001: MASEKHFKYV ILGGGVAAGY AAREFAKQGV KPGELAIISK EAVAPYERPA LSKGYLFPQN AARLPGFYVC VGSGGERLLP EWYSEKGIEL ILSTEIVKAD
101: LSTKTLTSAA GANFTYEILL IATGSSVIKL TDFGTPGADS NNILYLREID DADKLVAAIQ AKKGGKAVVV GGGYIGLELS AALKINDFDV TMVFPEPWCM
201: PRLFTADIAA FYEAYYTNKG VKVLKGTLAV GFDADANGDV TAVKLKDGTV LEADIVVVGV GGRPLTTLFK GQVAEEKGGI KTDAFFETSV PGVYAIGDVA
301: TFPLKMYNEL RRVEHVDHSR KSAEQAVKAI KGKESGEPVP EYDYLPYFYS RSFDLGWQFY GDNVGETILF GDSDPTSSKP KFGSYWIKDG KVLGAFLEGG
401: SPDENKAIAK VAKTQPPVAN LEELKKEGLQ FASKI

Best Arabidopsis Sequence Match ( AT3G52880.1 )
(BLAST)

001: MAEKSFKYII LGGGVSAGYA AKEFANQGVQ PGELAVISKE AVAPYERPAL SKGYLFPEGA ARLPGFHCCV GSGGEKLLPE SYKQKGIELI LSTEIVKADL
101: SAKSLVSATG DVFKYQTLII ATGSTVLRLT DFGVKGADSK NILYLREIDD ADKLVEAIKA KKGGKAVVVG GGYIGLELSA VLRINNLDVT MVFPEPWCMP
201: RLFTADIAAF YETYYTNKGV KIIKGTVASG FTAQPNGEVK EVQLKDGRTL EADIVIVGVG AKPLTSLFKG QVEEDKGGIK TDAFFKTSVP DVYAVGDVAT
301: FPLKMYGDVR RVEHVDHSRK SAEQAVKAIK AAEGGAAVEE YDYLPFFYSR SFDLSWQFYG DNVGDSVLFG DSNPSNPKPR FGAYWVQGGK VVGAFMEGGS
401: GDENKALAKV AKARPSAESL DELVKQGISF AAKI

Arabidopsis Description

ATMDAR1Monodehydroascorbate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4J849]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.