CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017786_P001	Maize	extracellular, vacuole	81.87	78.21
EES05650	Sorghum	plasma membrane	69.25	71.43
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	70.88	70.73
TraesCS6B01G301200.1	Wheat	extracellular	71.49	70.62
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	69.45	69.45
Os02t0707000-00	Rice	plasma membrane	42.97	68.06
GSMUA_Achr6P09110_001	Banana	extracellular	65.17	67.8
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	71.08	67.77
KXG28119	Sorghum	cytosol	13.44	50.77
EES15190	Sorghum	golgi	44.6	50.58
KXG35115	Sorghum	peroxisome	44.6	50.34
KXG24413	Sorghum	mitochondrion, plastid	39.1	38.1
OQU91530	Sorghum	cytosol	6.92	34.69

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EntrezGene:8073853	UniProt:A0A1Z5RP74	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	EnsemblPlants:OQU85544	ProteinID:OQU85544
ProteinID:OQU85544.1	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF1
EnsemblPlantsGene:SORBI_3004G266500	SUPFAM:SSF51905	SUPFAM:SSF55424	TMHMM:TMhelix	UniParc:UPI0001A85D82	RefSeq:XP_002452675.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:61093953..61097395

Molecular Weight (calculated)

51962.1 Da

IEP (calculated)

7.441

GRAVY (calculated)

0.113

Length

491 amino acids

Sequence
(BLAST)

001: MGRAFAYVIL GGGVAAGYAA LEFVRLRTDG AAGELCIISD EAVAPYERPA LSKGYLFPEG AARLPAFHTC VGANDQLLTA DWYKEHGIEL ILGTKVTSVD
101: VRGKTLDTST GETISYATLI VATGAQALKL EEIGGNGSDA ENVCYLRNIE DADKLVRVMR SCPGGDAVVI GGGYIGMECA AALVANNIKV TIVFPGKHCM
201: ENLFTPKIAE FYENYYASKG VTFIKGTVVS SLEISSGKVT TAILRDGRRL PADMVVVGIG ARANTELFQG KLAMEKRGIK VNEQMRTSDA SVYAVGDVAA
301: FPVKLLGGEV RRLEHVDCAR RTARHAVAAA LDPSGATGDI DYLPFFYSRV FALSWRFYGD NAGEAVHFGD LGFSASSPST PKFGAIWVSA GRIAGAFLEG
401: GSPEEYEAIA HAVRRGTAVP DVAVLARQGL AFIVREGRSG AARSRSGGLC GCGNTPSYAW HATVGVAAAV SIAAFAYWYG WKAPYLAKRD S

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.