Factsheet for TraesCS6A01G273500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G301200.1	Wheat	extracellular	91.45	90.34
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	94.5	90.1
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	87.58	87.4
OQU85544	Sorghum	extracellular	69.45	69.45
Os02t0707000-00	Rice	plasma membrane	42.16	66.77
GSMUA_Achr6P09110_001	Banana	extracellular	64.15	66.74
TraesCS6A01G273400.1	Wheat	extracellular	64.56	66.6
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	62.93	64.64
Zm00001d017786_P001	Maize	extracellular, vacuole	67.41	64.4
KRG94085	Soybean	peroxisome	61.1	62.76
CDX86468	Canola	extracellular	59.27	62.72
KRH07189	Soybean	plasma membrane	60.9	62.55
Solyc02g086710.2.1	Tomato	plastid	60.9	62.16
PGSC0003DMT400001279	Potato	plasma membrane	60.08	61.33
CDY44437	Canola	vacuole	59.27	61.26
CDY49764	Canola	plasma membrane, vacuole	57.43	60.91
AT3G27820.1	Thale cress	vacuole	59.88	60.25
Bra025303.1-P	Field mustard	extracellular	59.27	59.75
VIT_19s0014g05380.t01	Wine grape	extracellular	11.61	59.38
Bra033028.1-P	Field mustard	plasma membrane, vacuole	57.43	57.55
CDX95814	Canola	cytosol	5.91	52.73
TraesCS4A01G303300.1	Wheat	golgi	45.42	51.26
TraesCS7A01G277600.1	Wheat	peroxisome	45.42	51.26
TraesCS7A01G304000.1	Wheat	mitochondrion	37.47	37.1

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF1	SUPFAM:SSF51905	SUPFAM:SSF55424
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G273500	EnsemblPlants:TraesCS6A01G273500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:+:499796159..499798597

Molecular Weight (calculated)

51736.9 Da

IEP (calculated)

8.574

GRAVY (calculated)

0.081

Length

491 amino acids

Sequence
(BLAST)

001: MGRAFAYVIL GGGVAAGYAA LEFARRRAGA SPGELCIISD EAVAPYERPA LSKAYLLPQG AARLPAFHTC AGANDEVLTE QWYKDHGIEL VLATRVISAD
101: VRRKTLLTDS GETIGYKTLI VATGARASEL EEFGVRGSDA ANVCYLRSLE DADRMVGVMR SCHGGNAVVI GGGYIGMECA AALVANEVKV TMVFPGKHCV
201: GRLFTPKIAE FYEKYYAAKG VVFVKGTAVK SLEVSDGKVA AAILRDGRRL PADMVVVGIG ARANTGLFDG QLAVERGGIK VNGRMQTSDS AVYAVGDVAA
301: FPVALLGGAV RRFEHVDCAR RTARRAIEAI LEPSGGAAEE GKAFGYLPYF YSRVFALSWQ FYGDNAGEAV HFGDFSPPGA GGKAKFGACW VSGGRVAGAF
401: IEGGSREENE AMASAVRSRA AIADVAAELG SRGLGFADEE SRRKGVRRGG LASGDRPTYA RHATVGVAAA VSIAAFAYWY GWMAPYVVKQ C

Best Arabidopsis Sequence Match ( AT3G09940.1 )
(BLAST)

001: MAEEKSYKYV IIGGGVAGGY AAREFSNQGL KPGELAIISK EPVPPFERPE LTKVYIDLEV NPTLANIYVC AGTGEAKQYP NWYKEKGIDL IVGTEIVKAD
101: LASKTLVSDD GKIYKYQTLL IATGSTNIRL SEIGVQEADV KNIFYLREIE DSDELALAME LYVQRGKAVI IGGGFLGLEI SSALRANNHE VTMVFPEPWL
201: VHRFFTAEIA SFYESYYANK GIKIIKGTVA TGFSTNSDGE VTEVKLEDGR TLEANIVVAG VGARPATSLF KGQLEEEKGG IKTDGFFKTS VPDVYALGDV
301: ATFPMKMYGG TRRVEHADNA RKSAAQAVKA IKAGEEGKTI PDYDYLPYFY SRFFKLSWEF YGENVGESVL FGDNDPKSPK PKFGTYWVKD GKVVGVFLEG
401: GTQEEHKAIA KVARAQPSVE SLDVLSEEGL SFATKFYSTS L

Arabidopsis Description

MDAR3Monodehydroascorbate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.