CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86468	Canola	extracellular	96.84	99.14
AT3G27820.1	Thale cress	vacuole	92.84	90.37
CDY49764	Canola	plasma membrane, vacuole	86.74	88.98
CDX95814	Canola	cytosol	9.47	81.82
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	79.16	78.66
Solyc02g086710.2.1	Tomato	plastid	78.74	77.75
PGSC0003DMT400001279	Potato	plasma membrane	78.11	77.13
KRH07189	Soybean	plasma membrane	76.42	75.94
KRG94085	Soybean	peroxisome	75.16	74.69
GSMUA_Achr6P09110_001	Banana	extracellular	72.0	72.46
TraesCS6D01G254000.1	Wheat	extracellular	70.32	70.17
TraesCS6A01G273400.1	Wheat	extracellular	70.32	70.17
Zm00001d017787_P001	Maize	extracellular	69.68	69.25
Os02t0707100-01	Rice	plasma membrane	69.05	68.91
TraesCS6B01G301300.1	Wheat	extracellular	70.32	62.9
VIT_19s0014g05380.t01	Wine grape	extracellular	12.63	62.5
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	61.26	59.27
TraesCS6B01G301200.1	Wheat	extracellular	61.68	58.95
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	60.84	58.74
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	61.47	56.7
Zm00001d017786_P001	Maize	extracellular, vacuole	60.0	55.45
Os02t0707000-00	Rice	plasma membrane	35.58	54.52
CDY11263	Canola	peroxisome	47.58	51.95
CDX80881	Canola	peroxisome	47.58	51.95
CDY13340	Canola	peroxisome	47.37	51.84
CDX73597	Canola	peroxisome	47.16	51.61
CDX78130	Canola	peroxisome	47.16	51.61
KXG28119	Sorghum	cytosol	12.42	45.38
CDY07945	Canola	peroxisome	41.47	44.37
CDX74001	Canola	cytosol	36.21	43.65
CDY25549	Canola	plastid	38.74	37.86
CDY34388	Canola	plastid	38.74	37.86
CDX93897	Canola	cytosol, peroxisome, plastid	15.37	30.54
OQU91530	Sorghum	cytosol	6.11	29.59

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	GO:A0A078I331	UniProt:A0A078I331	EnsemblPlants:CDY44437
ProteinID:CDY44437	ProteinID:CDY44437.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00080133001
InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557
PANTHER:PTHR43557:SF5	SUPFAM:SSF51905	SUPFAM:SSF55424	TMHMM:TMhelix	UniParc:UPI0004EDBA10	SEG:seg

Description

BnaC07g24750DBnaC07g24750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I331]

Coordinates

chrLK032589:+:72110..75219

Molecular Weight (calculated)

52157.6 Da

IEP (calculated)

7.103

GRAVY (calculated)

-0.012

Length

475 amino acids

Sequence
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSE GELCIISEEP VAPYERPALS KGFLLPEDPA RLPSFHTCVG ANDEKLTPKW YKEHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLSDA NRLATAIQSS ANGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVE FIKGTVLTSF EFDSDKKVTA VNLKNGNHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSKMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIME PEKTGEFDYL PFFYSRVFAF SWQFYGDPVG EVVHFGEFEE GKTFGAYWIK KGHLVGSFLE GGTKEEYDTI
401: SKATQLKPAV TDLEELGRVG LGFAETVVSQ HIVPEASRVV MVEKPLHVWH AATGVLVAAS VAVFAFWYGR RRRRW

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.