Factsheet for TraesCS6D01G253900.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	90.1	94.5
TraesCS6B01G301200.1	Wheat	extracellular	90.87	94.17
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	84.08	88.01
OQU85544	Sorghum	extracellular	67.77	71.08
Os02t0707000-00	Rice	plasma membrane	41.16	68.39
TraesCS6D01G254000.1	Wheat	extracellular	62.91	68.07
GSMUA_Achr6P09110_001	Banana	extracellular	61.55	67.16
Zm00001d017786_P001	Maize	extracellular, vacuole	65.44	65.56
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	60.58	65.27
KRG94085	Soybean	peroxisome	58.45	62.97
KRH07189	Soybean	plasma membrane	58.45	62.97
CDX86468	Canola	extracellular	56.5	62.72
Solyc02g086710.2.1	Tomato	plastid	58.45	62.58
PGSC0003DMT400001279	Potato	plasma membrane	57.86	61.95
CDY44437	Canola	vacuole	56.7	61.47
CDY49764	Canola	plasma membrane, vacuole	54.76	60.91
AT3G27820.1	Thale cress	vacuole	57.28	60.45
Bra025303.1-P	Field mustard	extracellular	56.7	59.96
Bra033028.1-P	Field mustard	plasma membrane, vacuole	54.95	57.76
VIT_19s0014g05380.t01	Wine grape	extracellular	10.68	57.29
CDX95814	Canola	cytosol	5.63	52.73
TraesCS4D01G009200.1	Wheat	golgi	43.88	51.95
TraesCS7D01G277500.1	Wheat	peroxisome	43.88	51.95
TraesCS7D01G299500.1	Wheat	mitochondrion	36.7	37.5

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF1	SUPFAM:SSF51905	SUPFAM:SSF55424
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G253900	EnsemblPlants:TraesCS6D01G253900.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:-:358221781..358224374

Molecular Weight (calculated)

54837.8 Da

IEP (calculated)

8.501

GRAVY (calculated)

0.013

Length

515 amino acids

Sequence
(BLAST)

001: MGRAFAYVIL GGGVAAGYAA LEFARRRAGA SPGELCIISD EAVAPYERPA LSKGYLLPQG AARLPAFHTC AGANDEVLTE QWYKDHGIEL VLATRVISAD
101: VRRKTLLTDS GETIGYKTLI VATGAREERM NEGRLYLQMW RGVRASELEE FGVRGSDAAN VCYLRSLEDA DKMVGVMKPC HGGNAVVIGG GYIGMECAAA
201: LVANEIKVTM VFPGKHCMGR LFTPKIAEFY EKYYAAKGVV FVKGTAVKSL EVSDGKVAAA ILRDGRRLPA DMVVVGIGAR ANTGLFDGQL AMERGGIKVN
301: GRMQTSDAAV YAVGDVAAFP VALLGGDVRR FEHVDCARRT ARRAIEAILE PSGGAAEEGK AFGYLPYFYS RVFALSWQFY GDNAGEAVHF GDFSPPVAGG
401: KPKFGACWVS GGRVAGAFIE GGSPEENEAM ASAVRSRAAI ADLAAELGSR GLGFADEESR RKGVRRGALA AGDRPTYARH ATVGVAAAVS IAAFAYWYGW
501: MAPYVVKRDF SDPKL

Best Arabidopsis Sequence Match ( AT3G09940.1 )
(BLAST)

001: MAEEKSYKYV IIGGGVAGGY AAREFSNQGL KPGELAIISK EPVPPFERPE LTKVYIDLEV NPTLANIYVC AGTGEAKQYP NWYKEKGIDL IVGTEIVKAD
101: LASKTLVSDD GKIYKYQTLL IATGSTNIRL SEIGVQEADV KNIFYLREIE DSDELALAME LYVQRGKAVI IGGGFLGLEI SSALRANNHE VTMVFPEPWL
201: VHRFFTAEIA SFYESYYANK GIKIIKGTVA TGFSTNSDGE VTEVKLEDGR TLEANIVVAG VGARPATSLF KGQLEEEKGG IKTDGFFKTS VPDVYALGDV
301: ATFPMKMYGG TRRVEHADNA RKSAAQAVKA IKAGEEGKTI PDYDYLPYFY SRFFKLSWEF YGENVGESVL FGDNDPKSPK PKFGTYWVKD GKVVGVFLEG
401: GTQEEHKAIA KVARAQPSVE SLDVLSEEGL SFATKFYSTS L

Arabidopsis Description

MDAR3Monodehydroascorbate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.