CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, plastid
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g05380.t01	Wine grape	extracellular	20.0	11.46
CDX86468	Canola	extracellular	81.82	9.7
AT3G27820.1	Thale cress	vacuole	85.45	9.63
CDY44437	Canola	vacuole	81.82	9.47
CDY49764	Canola	plasma membrane, vacuole	76.36	9.07
Solyc02g086710.2.1	Tomato	plastid	69.09	7.9
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	67.27	7.74
PGSC0003DMT400001279	Potato	plasma membrane	67.27	7.69
KRH07189	Soybean	plasma membrane	65.45	7.53
KRG94085	Soybean	peroxisome	65.45	7.53
GSMUA_Achr6P09110_001	Banana	extracellular	61.82	7.2
TraesCS6D01G254000.1	Wheat	extracellular	61.82	7.14
TraesCS6A01G273400.1	Wheat	extracellular	61.82	7.14
Os02t0707100-01	Rice	plasma membrane	61.82	7.14
Zm00001d017787_P001	Maize	extracellular	61.82	7.11
TraesCS6B01G301300.1	Wheat	extracellular	61.82	6.4
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	52.73	5.91
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	52.73	5.89
TraesCS6B01G301200.1	Wheat	extracellular	52.73	5.84
CDX73597	Canola	peroxisome	45.45	5.76
CDX78130	Canola	peroxisome	45.45	5.76
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	52.73	5.63
CDX74001	Canola	cytosol	40.0	5.58
CDY13340	Canola	peroxisome	43.64	5.53
Zm00001d017786_P001	Maize	extracellular, vacuole	50.91	5.45
CDY07945	Canola	peroxisome	41.82	5.18
CDY11263	Canola	peroxisome	36.36	4.6
CDX80881	Canola	peroxisome	36.36	4.6
CDY34388	Canola	plastid	40.0	4.53
CDY25549	Canola	plastid	40.0	4.53
CDX93897	Canola	cytosol, peroxisome, plastid	9.09	2.09
Os02t0707000-00	Rice	plasma membrane	3.64	0.65
OQU91530	Sorghum	cytosol	0.0	0.0
KXG28119	Sorghum	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX95814

EnsemblPlantsGene:GSBRNA2T00101760001

ProteinID:CDX95814

ProteinID:CDX95814.1

UniParc:UPI0004EF3421

MapMan:35.1

Description

BnaC05g35650D

Coordinates

chrLK031891:-:468608..468880

Molecular Weight (calculated)

6386.7 Da

IEP (calculated)

9.181

GRAVY (calculated)

-0.375

Length

55 amino acids

Sequence
(BLAST)

1: MECAASLVIN KNQLERLFTP KIASLYEDYD RAKEVKFIKG TVLTSFEFDS NKKVR

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.