CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94085	Soybean	peroxisome	94.98	94.98
Solyc02g086710.2.1	Tomato	plastid	80.96	80.46
PGSC0003DMT400001279	Potato	plasma membrane	80.54	80.04
CDX86468	Canola	extracellular	75.52	77.8
CDY44437	Canola	vacuole	75.94	76.42
Bra025303.1-P	Field mustard	extracellular	76.78	75.36
AT3G27820.1	Thale cress	vacuole	76.78	75.2
CDY49764	Canola	plasma membrane, vacuole	72.38	74.73
GSMUA_Achr6P09110_001	Banana	extracellular	73.64	74.58
Zm00001d017787_P001	Maize	extracellular	71.76	71.76
Bra033028.1-P	Field mustard	plasma membrane, vacuole	73.43	71.63
TraesCS6D01G254000.1	Wheat	extracellular	70.5	70.8
Os02t0707100-01	Rice	plasma membrane	70.5	70.8
TraesCS6A01G273400.1	Wheat	extracellular	69.67	69.96
VIT_19s0014g05380.t01	Wine grape	extracellular	13.81	68.75
CDX95814	Canola	cytosol	7.53	65.45
TraesCS6B01G301300.1	Wheat	extracellular	70.29	63.28
TraesCS6B01G301200.1	Wheat	extracellular	63.39	60.97
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	62.55	60.9
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	62.55	60.77
Zm00001d017786_P001	Maize	extracellular, vacuole	62.97	58.56
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	62.97	58.45
Os02t0707000-00	Rice	plasma membrane	36.4	56.13
KRH30834	Soybean	nucleus	48.74	53.81
KRH32676	Soybean	endoplasmic reticulum, extracellular, nucleus	48.33	53.35
KXG28119	Sorghum	cytosol	11.72	43.08
KRH59968	Soybean	plastid	33.47	37.91
KRH41238	Soybean	nucleus	38.08	37.3
OQU91530	Sorghum	cytosol	5.86	28.57

Protein Annotations

MapMan:10.4.1.2	EntrezGene:100816879	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EMBL:ACUP02009947	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	EnsemblPlantsGene:GLYMA_16G073100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	UniProt:I1MLW5	InterPro:IPR016156	InterPro:IPR036188
EnsemblPlants:KRH07189	ProteinID:KRH07189	ProteinID:KRH07189.1	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411
PANTHER:PTHR43557	PANTHER:PTHR43557:SF5	SUPFAM:SSF51905	SUPFAM:SSF55424	TMHMM:TMhelix	UniParc:UPI0001D62D84
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:7376670..7381613

Molecular Weight (calculated)

51984.5 Da

IEP (calculated)

7.546

GRAVY (calculated)

0.064

Length

478 amino acids

Sequence
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFVKKGVSH GELCIISDEP VAPYERPALS KGFLLPEAAA RLPSFHTCVG ANEERLTPKW YKEHGIELVL GTGVKSTDVK
101: RKTLLTTTGE TISYKILIVA TGARALKLEE FGVSGSDAEN VCYLRHIADA NRLVDVMQSC PGGNAVVIGG GYIGMECAAS LVINKINVTM VFPEEHCMAR
201: LFTSKIANYY EEYYKSRGVN FIKGTVLSSF DFDSNGKVTA VNLRDGTTLS VDMVVVGIGI RPNTGLFEGQ LTLEKGGIKV NGMLQSSNSS VYAIGDVAAF
301: PVKAFGETRR LEHVDSARKS AIHVVSSIME PNKTGEFDYI PFFYSRVFTL SWQFYGDNVG EVVYYGDMSG SAFGAYWVSK GHLVGAFLEG GTKEEYEAIA
401: KATRLRPAIE DLTELERQGL SFAVTVSQKP VVPPPVEVRA SDLLLEKPLY AWHATAGVII AASIAAFAYF YGKKRRRW

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.