Factsheet for TraesCS6B01G301200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	90.34	91.45
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	94.17	90.87
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	87.32	88.21
OQU85544	Sorghum	extracellular	70.62	71.49
Os02t0707000-00	Rice	plasma membrane	42.66	68.39
GSMUA_Achr6P09110_001	Banana	extracellular	63.98	67.37
Zm00001d017786_P001	Maize	extracellular, vacuole	67.81	65.56
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	62.58	65.06
KRG94085	Soybean	peroxisome	60.97	63.39
KRH07189	Soybean	plasma membrane	60.97	63.39
CDX86468	Canola	extracellular	58.75	62.93
Solyc02g086710.2.1	Tomato	plastid	60.56	62.58
PGSC0003DMT400001279	Potato	plasma membrane	59.96	61.95
TraesCS6B01G301300.1	Wheat	extracellular	66.0	61.77
CDY44437	Canola	vacuole	58.95	61.68
CDY49764	Canola	plasma membrane, vacuole	57.14	61.34
AT3G27820.1	Thale cress	vacuole	59.76	60.86
Bra025303.1-P	Field mustard	extracellular	58.95	60.16
Bra033028.1-P	Field mustard	plasma membrane, vacuole	57.34	58.16
VIT_19s0014g05380.t01	Wine grape	extracellular	10.87	56.25
CDX95814	Canola	cytosol	5.84	52.73
TraesCS4B01G010500.1	Wheat	golgi	44.87	51.26
TraesCS7B01G175300.1	Wheat	cytosol	45.47	50.0
TraesCS7B01G204400.1	Wheat	plastid	37.22	37.45

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF1	SUPFAM:SSF51905	SUPFAM:SSF55424
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G301200	EnsemblPlants:TraesCS6B01G301200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:539622241..539624529

Molecular Weight (calculated)

52811.2 Da

IEP (calculated)

8.287

GRAVY (calculated)

0.023

Length

497 amino acids

Sequence
(BLAST)

001: MGRAFAYVIL GGGVAAGYAA LEFVRRRAGS SPGEFCIISD EAVAPYERPA LSKGYLLPQG AARLPAFHTC AGANDEVLTE KWYKDHGIEL VLATRVISAD
101: VRQKTLLTDT GETISYKTLI VATGARASEL EEFGVRGSDA ANVCYLRSLE DADKMVGAMR SCHGGNAVVI GGGYIGMECA AALVANEIKV TMVFPGKHCM
201: GRLFTPKIAE FYEKYYAAKG VVFVKGTAVK SLEVSDGKVA ATILRDGRRL PADMVVVGIG ARANTGLFDG QLAMERGGIK VNGRMQTSDA AVYALGDVAA
301: FPVALLGGDV RRFEHVDCAR RTARRAIEAI LEPSGGAAEE GKPFGYLPYF YSRVFALSWQ FYGDNTGEAV HFGDFSPSGA AGKPKFGACW VSRGRVAGAF
401: IEGGSREENE AMASAVRRGA AIADVAAELE SCGLEFADEE SRRKGVRRGG LAAGDRPTYA RHATVGVAAA VSIAAFAYWY GWMAPYVVKR DFSGPKL

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.