Factsheet for VIT_19s0014g05380.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95814	Canola	cytosol	11.46	20.0
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	72.92	14.64
KRH07189	Soybean	plasma membrane	68.75	13.81
KRG94085	Soybean	peroxisome	68.75	13.81
CDY49764	Canola	plasma membrane, vacuole	62.5	12.96
CDX86468	Canola	extracellular	61.46	12.72
GSMUA_Achr6P09110_001	Banana	extracellular	62.5	12.71
Solyc02g086710.2.1	Tomato	plastid	63.54	12.68
PGSC0003DMT400001279	Potato	plasma membrane	63.54	12.68
CDY44437	Canola	vacuole	62.5	12.63
AT3G27820.1	Thale cress	vacuole	63.54	12.5
Bra033028.1-P	Field mustard	plasma membrane, vacuole	62.5	12.24
Bra025303.1-P	Field mustard	extracellular	61.46	12.12
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	59.38	11.61
TraesCS6D01G254000.1	Wheat	extracellular	57.29	11.55
TraesCS6A01G273400.1	Wheat	extracellular	57.29	11.55
Os02t0707100-01	Rice	plasma membrane	57.29	11.55
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	58.33	11.38
Zm00001d017787_P001	Maize	extracellular	56.25	11.3
TraesCS6B01G301200.1	Wheat	extracellular	56.25	10.87
Zm00001d017786_P001	Maize	extracellular, vacuole	57.29	10.7
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	57.29	10.68
TraesCS6B01G301300.1	Wheat	extracellular	57.29	10.36
VIT_08s0007g03610.t01	Wine grape	extracellular	40.62	8.99
VIT_02s0025g00340.t01	Wine grape	plastid	31.25	6.12
KXG28119	Sorghum	cytosol	3.12	2.31
Os02t0707000-00	Rice	plasma membrane	7.29	2.26
OQU91530	Sorghum	cytosol	1.04	1.02

Protein Annotations

ArrayExpress:VIT_19s0014g05380	EMBL:FN595229	EnsemblPlants:VIT_19s0014g05380.t01	EnsemblPlantsGene:VIT_19s0014g05380	Gene3D:3.50.50.60	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:IPR036188	PANTHER:PTHR43557	PANTHER:PTHR43557:SF2	PFAM:PF07992	ProteinID:CCB46484
ProteinID:CCB46484.1	SUPFAM:SSF51905	UniParc:UPI00021086E6	UniProt:F6H2D3	MapMan:50.1.6	:

Description

No Description!

Coordinates

chr19:-:5755770..5760048

Molecular Weight (calculated)

10329.4 Da

IEP (calculated)

3.835

GRAVY (calculated)

0.365

Length

96 amino acids

Sequence
(BLAST)

1: MVFGNLVYGV RALQLEEFGV AGSDAENVCY LRDLADATRL VDVMQSCTGG NAVLIGGGYI GMECAASLVI NKINLIQIEE ELGEIAVYAG EEWRQL

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.