Factsheet for VIT_02s0025g00340.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g081530.2.1	Tomato	plastid	77.96	79.25
PGSC0003DMT400032099	Potato	plastid	78.57	78.89
KRH59968	Soybean	plastid	67.55	78.44
CDY25549	Canola	plastid	77.55	78.19
CDY34388	Canola	plastid	77.55	78.19
Bra027670.1-P	Field mustard	plastid	76.73	77.85
KRH41238	Soybean	nucleus	76.94	77.25
AT1G63940.2	Thale cress	mitochondrion, plastid	76.33	75.86
GSMUA_Achr5P17510_001	Banana	plastid	68.57	70.15
Os08t0151800-01	Rice	mitochondrion	68.37	68.23
TraesCS7A01G304000.1	Wheat	mitochondrion	68.78	67.94
Zm00001d024633_P001	Maize	mitochondrion	68.98	67.74
TraesCS7B01G204400.1	Wheat	plastid	68.16	67.61
KXG24413	Sorghum	mitochondrion, plastid	68.98	67.06
TraesCS7D01G299500.1	Wheat	mitochondrion	68.98	67.06
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	67.14	66.2
CDX93897	Canola	cytosol, peroxisome, plastid	30.2	61.92
VIT_08s0007g03610.t01	Wine grape	extracellular	39.39	44.47
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	36.94	37.87
VIT_19s0014g05380.t01	Wine grape	extracellular	6.12	31.25

Protein Annotations

MapMan:10.4.1.2	EntrezGene:100253570	wikigene:100253570	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EMBL:AM486094
ProteinID:CAN64338	ProteinID:CAN64338.1	ProteinID:CBI34386	ProteinID:CBI34386.3	UniProt:D7TV61	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	EMBL:FN596251	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	EntrezGene:LOC100253570	wikigene:LOC100253570	PFAM:PF07992	PRINTS:PR00368
PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF6	SUPFAM:SSF51905	TIGR:TC70513	UniParc:UPI00015CD266
ArrayExpress:VIT_02s0025g00340	EnsemblPlantsGene:VIT_02s0025g00340	EnsemblPlants:VIT_02s0025g00340.t01	unigene:Vvi.11582	RefSeq:XP_002278648	RefSeq:XP_002278648.2

Description

No Description!

Coordinates

chr2:+:450368..457307

Molecular Weight (calculated)

53366.9 Da

IEP (calculated)

7.896

GRAVY (calculated)

-0.113

Length

490 amino acids

Sequence
(BLAST)

001: MASISNSLPL KHGISLWCPQ HASLNRTRLP SSFGSSASAR RYGVVSCAFA NENREFVIVG GGNAAGYAAR TFVEHGMADG KLCIVSKEAF APYERPALTK
101: GYLFPLDKKP ARLPGFHTCV GSGGERQTPD WYKEKGIEML YEDPVTGIDI EKQTLMTNSG KLLKYGSLII ATGCTASRLP DKIGGNLPGV HYIRDVADAD
201: SLISSLEKAR KVVIVGGGYI GMEVAAAAAG WKLDTTIIFP EDHLLQRLFT PTLARRYEEF YQENGVKFVK GASIKNIEAG SDGHVTAVKL ENGSTIEADT
301: IIIGIGAKPA VSPFERVGIN TTVGGIQVDG QFRTSVPGIF AIGDVAAFPL KMYNRIARVE HVDHARRSAQ HCINALLTAK THLYDYLPYF YSRVFEYEGS
401: PRKIWWQFFG DNVGETVEIG NFDPKIATFW IDSGKLKGVL LESGSPEEFQ LLPKLARSQP HVDMTKLQKA SSVEEALELA HAYVQAGAAV

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.