CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024633_P001	Maize	mitochondrion	94.25	95.19
Os08t0151800-01	Rice	mitochondrion	84.92	87.17
TraesCS7B01G204400.1	Wheat	plastid	83.13	84.82
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	81.15	82.29
TraesCS7A01G304000.1	Wheat	mitochondrion	80.75	82.06
TraesCS7D01G299500.1	Wheat	mitochondrion	80.56	80.56
GSMUA_Achr5P17510_001	Banana	plastid	72.62	76.41
KRH59968	Soybean	plastid	59.13	70.62
KRH41238	Soybean	nucleus	68.06	70.29
PGSC0003DMT400032099	Potato	plastid	67.86	70.08
Solyc08g081530.2.1	Tomato	plastid	66.87	69.92
Bra027670.1-P	Field mustard	plastid	66.67	69.57
VIT_02s0025g00340.t01	Wine grape	plastid	67.06	68.98
CDY34388	Canola	plastid	66.47	68.93
CDY25549	Canola	plastid	66.47	68.93
AT1G63940.2	Thale cress	mitochondrion, plastid	66.87	68.36
CDX93897	Canola	cytosol, peroxisome, plastid	26.39	55.65
EES15190	Sorghum	golgi	39.09	45.5
KXG35115	Sorghum	peroxisome	39.09	45.29
OQU85544	Sorghum	extracellular	38.1	39.1
EES05650	Sorghum	plasma membrane	36.71	38.87
KXG28119	Sorghum	cytosol	7.94	30.77
OQU91530	Sorghum	cytosol	4.96	25.51

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	UniProt:A0A1B6PFE9	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009628	GO:GO:0010319	GO:GO:0016491	GO:GO:0046686	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	EnsemblPlants:KXG24413	ProteinID:KXG24413	ProteinID:KXG24413.1	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF6	EnsemblPlantsGene:SORBI_3007G038600	SUPFAM:SSF51905
UniParc:UPI0001C80D99	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:3737519..3742576

Molecular Weight (calculated)

53893.0 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.078

Length

504 amino acids

Sequence
(BLAST)

001: MTSALRQKAA QMASAAAQCF SYSSSPATWA MRQRGGGGAG AGAGVLRLSS RRTFSVSAAA GFDNQNREYV IVGGGNAAGY AARTFVEHGM ADGRLCIVSK
101: EPVPPYERPA LTKGYLFPPD KKPARLPGFH TCVGSGGQRQ TAEWYKENGI EVLYEDPVVA FDGKTQTLKT SSGKILKYGS LIISTGCEAS RLPEKIGGTL
201: PGVHYIRDVA DADSLVSSLG SAKKVVVIGG GYIGMEVAAA ACGWNLDTTI IFPEDHIMPR LFTPSLAKKY EELYQQNGVK FIKGALIDKL EAGSDGRVSS
301: AVLKDGSVVE ADTVIVGIGA KPVVSPFEAV GVSAEVGGIE VDSLFRTSVP GIFAIGDVAA FPLKMYDRVA RVEHVDHARK SAHHCVETLL TSQTKAYDYL
401: PYFYSRVFEY EGSARKIWWQ FYGDNVGEAV EVGSFDPKIA TFWIDSDSRL KGVFLESGTS EEFSLLPQLA KSQPVVDKSK LQAATSVENA LEIARSSLQS
501: SASV

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.