Factsheet for TraesCS7D01G299500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G304000.1	Wheat	mitochondrion	97.22	98.79
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	90.87	92.15
TraesCS7B01G204400.1	Wheat	plastid	89.29	91.09
Os08t0151800-01	Rice	mitochondrion	80.56	82.69
Zm00001d024633_P001	Maize	mitochondrion	80.36	81.16
KXG24413	Sorghum	mitochondrion, plastid	80.56	80.56
GSMUA_Achr5P17510_001	Banana	plastid	71.23	74.95
Bra027670.1-P	Field mustard	plastid	67.66	70.6
CDY25549	Canola	plastid	67.86	70.37
CDY34388	Canola	plastid	67.66	70.16
Solyc08g081530.2.1	Tomato	plastid	66.87	69.92
PGSC0003DMT400032099	Potato	plastid	67.66	69.88
AT1G63940.2	Thale cress	mitochondrion, plastid	67.86	69.37
VIT_02s0025g00340.t01	Wine grape	plastid	67.06	68.98
KRH59968	Soybean	plastid	57.74	68.96
KRH41238	Soybean	nucleus	66.67	68.85
CDX93897	Canola	cytosol, peroxisome, plastid	27.58	58.16
TraesCS7D01G277500.1	Wheat	peroxisome	38.29	44.37
TraesCS4D01G009200.1	Wheat	golgi	37.7	43.68
TraesCS6D01G254000.1	Wheat	extracellular	36.71	38.87
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	37.5	36.7

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0010319	GO:GO:0016491	GO:GO:0046686	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF6
SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS7D01G299500	EnsemblPlants:TraesCS7D01G299500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:-:379321997..379327072

Molecular Weight (calculated)

54172.7 Da

IEP (calculated)

7.139

GRAVY (calculated)

-0.049

Length

504 amino acids

Sequence
(BLAST)

001: MTSVFSLEVA LALRRKAAQM ASAAAAAAAG MGCYSQTSWA LRRLGAGGGA LASAATRRRN CSVAAAVFDN QNREYVIVGG GNAAGYAART FVEHGMADGR
101: LCIVSKEAVP PYERPALTKG YLFPPEKKPA RLPGFHTCVG SGGQRQTAEW YKENGIEVLY EDPVEAFDGK TQTLKTSSGK ILKYGSLIIS TGCAAARLPE
201: KIGGDLPGVH YIRDVADADS LVSSLGKAKK IVVIGGGYIG MEVAAAACGW NLDTTIIFPE DHIMPRLFTP SLAKKYEELY EQNGVKFVKG ALIDKLDAGS
301: DGRVSSAILK DGSVVEADTV IVGIGAKPSV SPFEAVGVNI EVGGIEVDSM FRTSIPSIFA IGDVAAFPLK MYDRIARVEH VDHARKSAQH CIETLLTSQA
401: KAYDYLPYFY SRVFEYEGSS RKIWWQFYGD NVGETIEVGN FDPKIATFWI DSDSRLKGVF LESGTPEEFS LLPKLARSQP IVDKAKLKSA TSVEDALEIA
501: RSSL

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.