Factsheet for Solyc08g081530.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
peroxisome 2

Predictors

GFP

MS/MS

Papers

plastid: 20230481

plastid: 20363867
plastid: 22908117
plastid: 26371478
unclear: 26455813
endoplasmic reticulum: 29145071
extracellular: 29876421

gfp PMID: 20230481 doi

F Li, QY Wu, YL Sun, LY Wang, XH Yang, QW Meng

State Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, Shandong 271018, P.R. China.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032099	Potato	plastid	97.3	96.11
Bra027670.1-P	Field mustard	plastid	78.63	78.47
CDY25549	Canola	plastid	79.05	78.4
CDY34388	Canola	plastid	78.84	78.19
VIT_02s0025g00340.t01	Wine grape	plastid	79.25	77.96
KRH59968	Soybean	plastid	67.43	77.01
AT1G63940.2	Thale cress	mitochondrion, plastid	78.01	76.27
KRH41238	Soybean	nucleus	76.14	75.2
GSMUA_Achr5P17510_001	Banana	plastid	71.37	71.82
Os08t0151800-01	Rice	mitochondrion	70.33	69.04
Zm00001d024633_P001	Maize	mitochondrion	70.95	68.54
TraesCS7B01G204400.1	Wheat	plastid	69.71	68.02
TraesCS7A01G304000.1	Wheat	mitochondrion	69.71	67.74
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	69.5	67.4
KXG24413	Sorghum	mitochondrion, plastid	69.92	66.87
TraesCS7D01G299500.1	Wheat	mitochondrion	69.92	66.87
CDX93897	Canola	cytosol, peroxisome, plastid	31.12	62.76
Solyc09g009390.2.1	Tomato	extracellular	39.42	43.88
Solyc02g086710.2.1	Tomato	plastid	37.76	37.84

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EMBL:AY971875	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009628	GO:GO:0010319	GO:GO:0016491	GO:GO:0016656	GO:GO:0046686	GO:GO:0050660
GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411
PANTHER:PTHR43557	PANTHER:PTHR43557:SF6	UniProt:Q49B52	SUPFAM:SSF51905	EnsemblPlantsGene:Solyc08g081530.2	EnsemblPlants:Solyc08g081530.2.1
UniParc:UPI00017BB346	SEG:seg	:	:	:	:

Description

Monodehydroascorbate reductase 5, mitochondrial [Source:Projected from Arabidopsis thaliana (AT1G63940) UniProtKB/Swiss-Prot;Acc:P92947]

Coordinates

chr8:+:64556769..64563291

Molecular Weight (calculated)

52549.7 Da

IEP (calculated)

7.607

GRAVY (calculated)

-0.144

Length

482 amino acids

Sequence
(BLAST)

001: MATTPNTMSI KQGLSLWCPQ SAVLNRISRV SVPSRSFRRS FVAASSFDNE NREYVVVGGG NAAGYAARTF VEHGQANGKL CIVTKEPYAP YERPALTKAY
101: LFPLDKKPAR LPGFHTCVGA GGERQTPDWY KEQGIEMLYE DPVTGIDIEK QTLTTNSGKL LKYGTLIIAT GCTASRFPEK IGGNLPGVHY IRDVADADSL
201: ISSLGKAKKL VVVGGGYIGM EVAAAAVAWK LDTTIIFPEE HLLSRLFTPS LAQKYEQLYQ DSGVKFVKGA KIKHLESGPD SRVTAVKLED GSSIETDTVV
301: IGIGAKPAVS PFDMVGLNNT VGGIEVDGQF RTNIPGIFAI GDVAAFPLKI YNRIARVEHV DHARKSAQHC IKSLLTAHTH TYDYLPYFYS RVFEYEGSSR
401: KVWWQFFGDN VGEAVEVGNF DPKVATFWID SGKLKGVLLE SGSPEEFQLL PKLARSQPSV DIAKLQNASS VEEALEIAQA SL

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.