CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2
peroxisome 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41238	Soybean	nucleus	88.39	76.43
VIT_02s0025g00340.t01	Wine grape	plastid	78.44	67.55
Solyc08g081530.2.1	Tomato	plastid	77.01	67.43
PGSC0003DMT400032099	Potato	plastid	77.96	67.42
Bra027670.1-P	Field mustard	plastid	74.88	65.42
CDY25549	Canola	plastid	74.88	65.02
CDY34388	Canola	plastid	74.88	65.02
AT1G63940.2	Thale cress	mitochondrion, plastid	75.12	64.3
GSMUA_Achr5P17510_001	Banana	plastid	70.85	62.42
Os08t0151800-01	Rice	mitochondrion	70.85	60.9
Zm00001d024633_P001	Maize	mitochondrion	71.33	60.32
KXG24413	Sorghum	mitochondrion, plastid	70.62	59.13
TraesCS7B01G204400.1	Wheat	plastid	68.72	58.7
TraesCS7A01G304000.1	Wheat	mitochondrion	68.72	58.47
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	68.01	57.75
TraesCS7D01G299500.1	Wheat	mitochondrion	68.96	57.74
CDX93897	Canola	cytosol, peroxisome, plastid	28.2	49.79
KRH30834	Soybean	nucleus	40.05	39.03
KRH32676	Soybean	endoplasmic reticulum, extracellular, nucleus	39.81	38.8
KRH07189	Soybean	plasma membrane	37.91	33.47
KRG94085	Soybean	peroxisome	37.68	33.26

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	UniProt:A0A0R0JZ96	EMBL:ACUP02003346	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	EnsemblPlantsGene:GLYMA_05G211500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	EnsemblPlants:KRH59968	ProteinID:KRH59968	ProteinID:KRH59968.1	PFAM:PF07992
PRINTS:PR00368	PANTHER:PTHR43557	PANTHER:PTHR43557:SF6	SUPFAM:SSF51905	UniParc:UPI0006ED57A8	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:39299539..39305224

Molecular Weight (calculated)

46836.3 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.181

Length

422 amino acids

Sequence
(BLAST)

001: MAAISNSLSL KHSFSLLLPL PSNSQDVRDA ARTFVEHGMA DGRLCIVTKE PYAPYERPAL TRAYLFPPDK KPARLPGFHT CVGSGGERQT PEWYKENVIE
101: MLYEDPVKDI DIEKHTLTTS SGKLLKYGSL IIATGCTASR FPEKIGGNLP GVHYIRHVAD ADTLILSLEK AKKVVVVRGG YIGMEVAAAA VGWKLDATII
201: FPEDDLLQRL FTPSLARRYE ELYQKNGVKV LKVIIGIGAR PAVSPFERVG QNTDVGGIQV DGQFRTSTPG IFAVGDVAAF PLKIYNRISR VEHVDHARRS
301: AQHCVKALLS AQTHTYDYLP YFYSRIFEYE GSPRKVWWQF FRDKVGETVE IGNFDPKIAT FWIESGKLKG VLLESGSPEE FQLLPKLARS QPLIDKAKLQ
401: NATSVEEALE IARGSLQGEA VV

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.