Factsheet for TraesCS7A01G304000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G299500.1	Wheat	mitochondrion	98.79	97.22
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	92.74	92.56
TraesCS7B01G204400.1	Wheat	plastid	90.52	90.89
Os08t0151800-01	Rice	mitochondrion	82.06	82.89
Zm00001d024633_P001	Maize	mitochondrion	81.85	81.36
KXG24413	Sorghum	mitochondrion, plastid	82.06	80.75
GSMUA_Achr5P17510_001	Banana	plastid	72.18	74.74
Bra027670.1-P	Field mustard	plastid	68.55	70.39
CDY25549	Canola	plastid	68.75	70.16
CDY34388	Canola	plastid	68.55	69.96
Solyc08g081530.2.1	Tomato	plastid	67.74	69.71
PGSC0003DMT400032099	Potato	plastid	68.55	69.67
AT1G63940.2	Thale cress	mitochondrion, plastid	68.55	68.97
VIT_02s0025g00340.t01	Wine grape	plastid	67.94	68.78
KRH59968	Soybean	plastid	58.47	68.72
KRH41238	Soybean	nucleus	67.34	68.44
CDX93897	Canola	cytosol, peroxisome, plastid	27.82	57.74
TraesCS7A01G277600.1	Wheat	peroxisome	38.91	44.37
TraesCS4A01G303300.1	Wheat	golgi	38.51	43.91
TraesCS6A01G273400.1	Wheat	extracellular	37.5	39.08
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	37.1	37.47

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0010319	GO:GO:0016491	GO:GO:0046686	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PFscan:PS51257	PANTHER:PTHR43557
PANTHER:PTHR43557:SF6	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS7A01G304000	EnsemblPlants:TraesCS7A01G304000.1	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:427810665..427815625

Molecular Weight (calculated)

53245.4 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.084

Length

496 amino acids

Sequence
(BLAST)

001: MTSALRQKAA QMASAAAAAA AGTGCYSQTS WALRRLGAGG GALASAATRR RNCSVAAAVF DNQNREYVIV GGGNAAGYAA RTFVEHGMAD GRLCIVSKEA
101: VPPYERPALT KGYLFPPEKK PARLPGFHTC VGSGGQRQTA EWYKENGIEV LYEDPVEAFD GKTQTLKTSS GKILKYGSLI ISTGCAAARL PEKIGGDLPG
201: VHYIRDVADA DSLVSSLGKA KKIVVIGGGY IGMEVAAAAC GWNLDTTIIF PEDHIMPRLF TPSLAKKYEE LYEQNGVKFV KGALIDKLDA GSDGRVSSAI
301: LKDGSVVEAD TVIVGIGAKP SVSPFEAVGV NIEVGGIEVD SMFRTSIPSI FAIGDVAAFP LKMYDRIARV EHVDHARKSA QHCIETLLTS QAKAYDYLPY
401: FYSRVFEYEG SSRKIWWQFY GDNVGETIEV GNFDPKIATF WIDSDSRLKG VFLESGTSEE FSLLPKLARS QPIVDKAKLK SATSVEDALE IARSSL

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.