Factsheet for TraesCS4A01G303300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G009200.1	Wheat	golgi	97.93	97.93
TraesCS4B01G010500.1	Wheat	golgi	97.47	97.47
Os09t0567300-01	Rice	plasma membrane	88.74	88.74
KXG35115	Sorghum	peroxisome	87.36	87.36
Zm00001d005347_P001	Maize	peroxisome, plasma membrane	86.9	86.9
TraesCS7A01G277600.1	Wheat	peroxisome	80.69	80.69
GSMUA_Achr1P17030_001	Banana	cytosol, mitochondrion, peroxisome	80.23	80.41
GSMUA_Achr2P20300_001	Banana	extracellular	78.16	78.34
VIT_08s0007g03610.t01	Wine grape	extracellular	78.16	78.34
Solyc09g009390.2.1	Tomato	extracellular	77.47	77.83
KRH30834	Soybean	nucleus	77.24	77.6
KRH32676	Soybean	endoplasmic reticulum, extracellular, nucleus	77.24	77.6
PGSC0003DMT400007000	Potato	cytosol	77.01	77.37
CDX78130	Canola	peroxisome	75.63	75.81
Bra006954.1-P	Field mustard	peroxisome	75.4	75.58
CDX73597	Canola	peroxisome	75.4	75.58
CDY13340	Canola	peroxisome	75.17	75.35
AT3G52880.2	Thale cress	extracellular, vacuole	75.63	70.6
AT5G03630.1	Thale cress	peroxisome	70.57	70.57
CDX80881	Canola	peroxisome	68.97	68.97
CDY11263	Canola	peroxisome	68.74	68.74
Bra005775.1-P	Field mustard	cytosol	68.28	68.28
AT3G09940.1	Thale cress	cytosol	62.76	61.9
Bra001293.1-P	Field mustard	cytosol	50.8	55.95
CDX74001	Canola	cytosol	50.57	55.84
CDY07945	Canola	peroxisome	56.78	55.63
TraesCS6A01G273400.1	Wheat	extracellular	53.1	48.53
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	51.26	45.42
TraesCS7A01G304000.1	Wheat	mitochondrion	43.91	38.51

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0016656	GO:GO:0050660	GO:GO:0055114	GO:GO:0098869
InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557
PANTHER:PTHR43557:SF3	SUPFAM:SSF51905	SUPFAM:SSF55424	EnsemblPlantsGene:TraesCS4A01G303300	EnsemblPlants:TraesCS4A01G303300.1	SEG:seg

Description

No Description!

Coordinates

chr4A:+:599318185..599321542

Molecular Weight (calculated)

46466.2 Da

IEP (calculated)

4.918

GRAVY (calculated)

-0.066

Length

435 amino acids

Sequence
(BLAST)

001: MASGKHFKYV VLGGGVSGGY AAREFAKQGV QPGELAIISK EAVAPYERPA LSKAYLFPQN PARLPGFHVC VGSGGERLLP EWYSEKGIEL ILSTEIVKAD
101: LASKTLTSEA GATFTYEILL IATGSSVIKL SDFGTQGADS NNILYLREVD DADQLYAAIQ AKKGGKAVVV GGGYIGLELS AVLKMNDLDV TMVFPEPWCM
201: PRLFTAEIAA FYESYYTNKG VKILKGTIAV GFDADANGDV TAVKLKDGSV LDADIVVVGV GGRPLTNLFK GQVAEEKGGI KTDAFFETSV PGVYAVGDVA
301: TFPMKIYNDE RRVEHVDHSR KSAEQAVKAI KGKEAGSAVE EYDYLPYFYS RSFDLSWQFY GDNVGDAILF GDADPSSTKP KFGSYWVKDG KCVGAFLEGG
401: SPDENAAIAK LARAQPPAAS PDELKAAGLQ FASKI

Best Arabidopsis Sequence Match ( AT3G09940.1 )
(BLAST)

001: MAEEKSYKYV IIGGGVAGGY AAREFSNQGL KPGELAIISK EPVPPFERPE LTKVYIDLEV NPTLANIYVC AGTGEAKQYP NWYKEKGIDL IVGTEIVKAD
101: LASKTLVSDD GKIYKYQTLL IATGSTNIRL SEIGVQEADV KNIFYLREIE DSDELALAME LYVQRGKAVI IGGGFLGLEI SSALRANNHE VTMVFPEPWL
201: VHRFFTAEIA SFYESYYANK GIKIIKGTVA TGFSTNSDGE VTEVKLEDGR TLEANIVVAG VGARPATSLF KGQLEEEKGG IKTDGFFKTS VPDVYALGDV
301: ATFPMKMYGG TRRVEHADNA RKSAAQAVKA IKAGEEGKTI PDYDYLPYFY SRFFKLSWEF YGENVGESVL FGDNDPKSPK PKFGTYWVKD GKVVGVFLEG
401: GTQEEHKAIA KVARAQPSVE SLDVLSEEGL SFATKFYSTS L

Arabidopsis Description

MDAR3Monodehydroascorbate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.