CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78130	Canola	peroxisome	97.0	97.0
CDX73597	Canola	peroxisome	96.54	96.54
AT3G52880.2	Thale cress	extracellular, vacuole	94.93	88.41
Solyc09g009390.2.1	Tomato	extracellular	79.49	79.68
PGSC0003DMT400007000	Potato	cytosol	79.26	79.45
VIT_08s0007g03610.t01	Wine grape	extracellular	79.03	79.03
Zm00001d005347_P001	Maize	peroxisome, plasma membrane	77.88	77.7
KXG35115	Sorghum	peroxisome	77.88	77.7
Os09t0567300-01	Rice	plasma membrane	77.65	77.47
TraesCS4D01G009200.1	Wheat	golgi	75.81	75.63
TraesCS4B01G010500.1	Wheat	golgi	75.58	75.4
TraesCS4A01G303300.1	Wheat	golgi	75.35	75.17
GSMUA_Achr2P20300_001	Banana	extracellular	74.88	74.88
TraesCS7D01G277500.1	Wheat	peroxisome	74.19	74.02
EES15190	Sorghum	golgi	73.73	73.9
TraesCS7A01G277600.1	Wheat	peroxisome	73.96	73.79
GSMUA_Achr1P17030_001	Banana	cytosol, mitochondrion, peroxisome	73.5	73.5
Zm00001d049954_P001	Maize	extracellular	72.58	72.75
Os08t0557600-01	Rice	plasma membrane	72.58	72.41
TraesCS7B01G175300.1	Wheat	cytosol	73.73	70.8
CDY11263	Canola	peroxisome	70.51	70.34
CDX80881	Canola	peroxisome	70.51	70.34
CDX74001	Canola	cytosol	51.84	57.11
CDY07945	Canola	peroxisome	57.83	56.53
CDX86468	Canola	extracellular	52.07	48.71
CDY44437	Canola	vacuole	51.84	47.37
CDY49764	Canola	plasma membrane, vacuole	49.77	46.65
CDX95814	Canola	cytosol	5.53	43.64
CDY34388	Canola	plastid	43.09	38.48
CDY25549	Canola	plastid	43.09	38.48
CDX93897	Canola	cytosol, peroxisome, plastid	16.82	30.54

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	GO:A0A078FG04	UniProt:A0A078FG04	EnsemblPlants:CDY13340
ProteinID:CDY13340	ProteinID:CDY13340.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00071341001	InterPro:IPR016156
InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF5
SUPFAM:SSF51905	SUPFAM:SSF55424	UniParc:UPI0000351BBA	SEG:seg	:	:

Description

BnaC06g14170DBnaC06g14170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG04]

Coordinates

chrLK032034:+:448636..451462

Molecular Weight (calculated)

46541.6 Da

IEP (calculated)

5.596

GRAVY (calculated)

-0.066

Length

434 amino acids

Sequence
(BLAST)

001: MAEKSFKYII LGGGVSAGYA AKEFANQGVK PGELAVISKE AVAPYERPAL SKGYLFPEGA ARLPGFHCCV GSGGEKLLPE SYKQKGIELI LSTEIVKADL
101: AAKTLVSAAG DVFKYETLII ATGSTVLRLT DFGVKGADST NILYLREIDD ADKVVEAIKA KKGGKAVVVG GGYIGLELSS ALRINDFDVT MVFPEPWCMP
201: RLFTADIAAF YETYYTNKGV KIIKGTVASG FTAHPNGEVN EVQLKDGRSL EADIVIVGVG AKPLTSLFKG QVEEDKGGIK TDAFFKTSVP DVYAVGDVAT
301: FPLKMYGDMR RVEHVDHSRK SAEQAVKAIK AAEGGGTVEE YDYLPFFYSR SFDLSWQFYG DNVGDSVLFG DSNPSNPKPR FGAYWIQDGK VVGAFMEGGC
401: GDENKALAKV AKARPVAESL DELAKQGISF AAKI

Best Arabidopsis Sequence Match ( AT3G52880.1 )
(BLAST)

001: MAEKSFKYII LGGGVSAGYA AKEFANQGVQ PGELAVISKE AVAPYERPAL SKGYLFPEGA ARLPGFHCCV GSGGEKLLPE SYKQKGIELI LSTEIVKADL
101: SAKSLVSATG DVFKYQTLII ATGSTVLRLT DFGVKGADSK NILYLREIDD ADKLVEAIKA KKGGKAVVVG GGYIGLELSA VLRINNLDVT MVFPEPWCMP
201: RLFTADIAAF YETYYTNKGV KIIKGTVASG FTAQPNGEVK EVQLKDGRTL EADIVIVGVG AKPLTSLFKG QVEEDKGGIK TDAFFKTSVP DVYAVGDVAT
301: FPLKMYGDVR RVEHVDHSRK SAEQAVKAIK AAEGGAAVEE YDYLPFFYSR SFDLSWQFYG DNVGDSVLFG DSNPSNPKPR FGAYWVQGGK VVGAFMEGGS
401: GDENKALAKV AKARPSAESL DELVKQGISF AAKI

Arabidopsis Description

ATMDAR1Monodehydroascorbate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4J849]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.