CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34388	Canola	plastid	99.38	99.38
Bra027670.1-P	Field mustard	plastid	97.74	98.34
AT1G63940.2	Thale cress	mitochondrion, plastid	95.68	94.32
PGSC0003DMT400032099	Potato	plastid	79.42	79.1
Solyc08g081530.2.1	Tomato	plastid	78.4	79.05
VIT_02s0025g00340.t01	Wine grape	plastid	78.19	77.55
KRH59968	Soybean	plastid	65.02	74.88
KRH41238	Soybean	nucleus	74.49	74.18
CDX93897	Canola	cytosol, peroxisome, plastid	36.21	73.64
GSMUA_Achr5P17510_001	Banana	plastid	69.55	70.56
Os08t0151800-01	Rice	mitochondrion	70.99	70.26
TraesCS7A01G304000.1	Wheat	mitochondrion	70.16	68.75
TraesCS7B01G204400.1	Wheat	plastid	69.55	68.42
TraesCS7D01G299500.1	Wheat	mitochondrion	70.37	67.86
HORVU7Hr1G072240.4	Barley	mitochondrion, plastid	69.14	67.61
Zm00001d024633_P001	Maize	mitochondrion	68.72	66.93
KXG24413	Sorghum	mitochondrion, plastid	68.93	66.47
CDY11263	Canola	peroxisome	39.09	43.68
CDX80881	Canola	peroxisome	39.09	43.68
CDX78130	Canola	peroxisome	38.68	43.32
CDX73597	Canola	peroxisome	38.68	43.32
CDY13340	Canola	peroxisome	38.48	43.09
CDX95814	Canola	cytosol	4.53	40.0
CDY49764	Canola	plasma membrane, vacuole	37.65	39.52
CDX86468	Canola	extracellular	37.45	39.22
CDY44437	Canola	vacuole	37.86	38.74
CDY07945	Canola	peroxisome	32.51	35.59
CDX74001	Canola	cytosol	27.57	34.01

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	GO:A0A078GJZ4	UniProt:A0A078GJZ4	EnsemblPlants:CDY25549
ProteinID:CDY25549	ProteinID:CDY25549.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00032806001	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF6	SUPFAM:SSF51905	SUPFAM:SSF55424
UniParc:UPI0004EE3E33	SEG:seg	:	:	:	:

Description

BnaC09g11740DBnaC09g11740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJZ4]

Coordinates

chrLK032176:+:486569..490179

Molecular Weight (calculated)

52582.7 Da

IEP (calculated)

7.886

GRAVY (calculated)

-0.133

Length

486 amino acids

Sequence
(BLAST)

001: MALASTTLPA KTGLSLWCPT SPSLARRHPA RFSPIGSRIA SRGVVTASFA NENREFVIIG GGNAAGYAAR TFVENGMADG RLCIVTKEAY APYERPALTK
101: AYLFPPEKKP ARLPGFHTCV GGGGERQTPD WYKEKGIEMI YEDPVTGADF EKQTLTTNTG KQLKYGSLII ATGCTASRFP DKIGGNLPGV HYIREVADAD
201: SLISSLGKSK KVVIVGGGYI GMEVAAAAVA WNLDTTIVFP EDQLLQRLFT PSLAQRYEEL YRQNGVKFVK GASINNLEAG SDGRVTAVKL ADGSTIEADT
301: VVIGIGAKPA IGPFETLAMN KSIGGIQVDG LFRTSTPGIF AIGDVAAFPL KIYDRMTRVE HVDHARRSAQ HCVKSLLTAH TDTYDYLPYF YSRVFEYEGS
401: SRKVWWQFYG DNVGETVEVG NFDPKIATFW IDSGRLKGVL VESGSPEEFQ LLPKLARSQP IVDKAKLASA SSVEEALEIA QAALQS

Best Arabidopsis Sequence Match ( AT1G63940.2 )
(BLAST)

001: MSAVRRVMAL ASTTLPTKSG LSLWCPSSPS LARRFPARFS PIGSRIASRS LVTASFANEN REFVIVGGGN AAGYAARTFV ENGMADGRLC IVTKEAYAPY
101: ERPALTKAYL FPPEKKPARL PGFHTCVGGG GERQTPDWYK EKGIEVIYED PVAGADFEKQ TLTTDAGKQL KYGSLIIATG CTASRFPDKI GGHLPGVHYI
201: REVADADSLI ASLGKAKKIV IVGGGYIGME VAAAAVAWNL DTTIVFPEDQ LLQRLFTPSL AQKYEELYRQ NGVKFVKGAS INNLEAGSDG RVSAVKLADG
301: STIEADTVVI GIGAKPAIGP FETLAMNKSI GGIQVDGLFR TSTPGIFAIG DVAAFPLKIY DRMTRVEHVD HARRSAQHCV KSLLTAHTDT YDYLPYFYSR
401: VFEYEGSPRK VWWQFFGDNV GETVEVGNFD PKIATFWIES GRLKGVLVES GSPEEFQLLP KLARSQPLVD KAKLASASSV EEALEIAQAA LQS

Arabidopsis Description

MDAR5MDAR6 [Source:UniProtKB/TrEMBL;Acc:A0A178WFH3]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.