CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033028.1-P	Field mustard	plasma membrane, vacuole	99.57	94.08
CDX86468	Canola	extracellular	88.77	88.58
CDY44437	Canola	vacuole	88.98	86.74
AT3G27820.1	Thale cress	vacuole	88.77	84.22
CDX95814	Canola	cytosol	9.07	76.36
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	76.67	74.27
Solyc02g086710.2.1	Tomato	plastid	76.89	74.01
PGSC0003DMT400001279	Potato	plasma membrane	76.03	73.18
KRH07189	Soybean	plasma membrane	74.73	72.38
KRG94085	Soybean	peroxisome	73.87	71.55
GSMUA_Achr6P09110_001	Banana	extracellular	70.84	69.49
TraesCS6D01G254000.1	Wheat	extracellular	69.76	67.86
TraesCS6A01G273400.1	Wheat	extracellular	69.76	67.86
Zm00001d017787_P001	Maize	extracellular	68.25	66.11
Os02t0707100-01	Rice	plasma membrane	67.17	65.34
VIT_19s0014g05380.t01	Wine grape	extracellular	12.96	62.5
TraesCS6B01G301300.1	Wheat	extracellular	69.76	60.83
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	60.91	57.43
TraesCS6B01G301200.1	Wheat	extracellular	61.34	57.14
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	60.69	57.11
Zm00001d017786_P001	Maize	extracellular, vacuole	61.12	55.06
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	60.91	54.76
Os02t0707000-00	Rice	plasma membrane	35.42	52.9
CDY11263	Canola	peroxisome	48.6	51.72
CDX80881	Canola	peroxisome	48.38	51.49
CDX73597	Canola	peroxisome	47.08	50.23
CDX78130	Canola	peroxisome	46.87	50.0
CDY13340	Canola	peroxisome	46.65	49.77
CDY07945	Canola	peroxisome	41.68	43.47
KXG28119	Sorghum	cytosol	12.1	43.08
CDX74001	Canola	cytosol	36.5	42.89
CDY34388	Canola	plastid	39.52	37.65
CDY25549	Canola	plastid	39.52	37.65
CDX93897	Canola	cytosol, peroxisome, plastid	15.12	29.29
OQU91530	Sorghum	cytosol	6.05	28.57

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	GO:A0A078IK06	UniProt:A0A078IK06	EnsemblPlants:CDY49764
ProteinID:CDY49764	ProteinID:CDY49764.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00093766001
InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557
PANTHER:PTHR43557:SF5	SUPFAM:SSF51905	SUPFAM:SSF55424	TMHMM:TMhelix	UniParc:UPI0004EEB2A5	SEG:seg

Description

BnaA02g29070DBnaA02g29070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK06]

Coordinates

chrLK032857:-:62825..65902

Molecular Weight (calculated)

50964.1 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.006

Length

463 amino acids

Sequence
(BLAST)

001: MGRAFVYVIV GGGVAAGYAA LEFTRKGVSD GELCIISDEP VAPYERPALS KGFLLPEDPT RLPSFHTCVG ANDEILTPKW YKEHGIELVL GTRVKSVDAR
101: RLTLVTSTGE TITYNFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLSDA DRLATAIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VLAGAHCMAR
201: LFTPKIATFY EDYYMGKGVK FIKGTVLTSF EFDSDKKVTA VNLKDGNQLP ADLVVVGIGI RPNISLFEGQ LIIEKGGIKV NSQMQSSESS VYAIGDVATF
301: PVKLYGEMRR LEHVDFARKS ARHAVSAIME PEKTGEFDYL PCFYSRFFAF SWQFYGDHVG EVVHFGEYDE GKVFGAYWVK EGHLVGCFLE GGTKEQYETI
401: SKATQLKPAV TDMEELEREG LGFTQTVVSQ QKPLHVWHAV TGVVVAASVT AFAFWYGRRR RRW

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.