Factsheet for VIT_14s0066g01100.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 3
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86468	Canola	extracellular	78.45	80.82
CDY44437	Canola	vacuole	78.66	79.16
Bra025303.1-P	Field mustard	extracellular	79.08	77.62
AT3G27820.1	Thale cress	vacuole	78.66	77.05
GSMUA_Achr6P09110_001	Banana	extracellular	75.94	76.91
CDY49764	Canola	plasma membrane, vacuole	74.27	76.67
TraesCS6D01G254000.1	Wheat	extracellular	73.64	73.95
TraesCS6A01G273400.1	Wheat	extracellular	73.01	73.32
VIT_19s0014g05380.t01	Wine grape	extracellular	14.64	72.92
Bra033028.1-P	Field mustard	plasma membrane, vacuole	74.69	72.86
Os02t0707100-01	Rice	plasma membrane	72.38	72.69
Zm00001d017787_P001	Maize	extracellular	72.59	72.59
CDX95814	Canola	cytosol	7.74	67.27
TraesCS6B01G301300.1	Wheat	extracellular	73.43	66.1
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	64.64	62.93
TraesCS6B01G301200.1	Wheat	extracellular	65.06	62.58
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	63.81	61.99
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	65.27	60.58
Zm00001d017786_P001	Maize	extracellular, vacuole	63.18	58.75
Os02t0707000-00	Rice	plasma membrane	37.03	57.1
VIT_08s0007g03610.t01	Wine grape	extracellular	50.0	55.07
VIT_02s0025g00340.t01	Wine grape	plastid	37.87	36.94

Protein Annotations

MapMan:10.4.1.2	EntrezGene:100267896	wikigene:100267896	Gene3D:3.30.390.30	Gene3D:3.50.50.60	UniProt:A5BNW8
EMBL:AM466081	ProteinID:CAN77104	ProteinID:CAN77104.1	ProteinID:CBI34906	ProteinID:CBI34906.3	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	EMBL:FN596252	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008234
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016787	GO:GO:0019538	GO:GO:0050660
GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	EntrezGene:LOC100267896	wikigene:LOC100267896	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF5	SUPFAM:SSF51905	SUPFAM:SSF55424
TIGR:TC60241	TMHMM:TMhelix	UniParc:UPI0001521592	ArrayExpress:VIT_14s0066g01100	EnsemblPlantsGene:VIT_14s0066g01100	EnsemblPlants:VIT_14s0066g01100.t01
unigene:Vvi.10488	RefSeq:XP_002277200	RefSeq:XP_002277200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr14:-:27565345..27571834

Molecular Weight (calculated)

52003.5 Da

IEP (calculated)

8.497

GRAVY (calculated)

-0.028

Length

478 amino acids

Sequence
(BLAST)

001: MGRAITYVIL GGGVAAGYAA LEFTKRGISH GELCIISEEP VVPYERPALS KGFLLPEAPS RLPSFHTCVG ANEERLTPKW YKEHGIELVL GTRVKSADVR
101: RKTLLTATGE TISYKILIIA TGARALQLEE FGVAGSDAEN VCYLRDLADA TRLVDVMKSC TGGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASYY EDYYKSKGVK FIKGTALSSF DIDDSGKVTA VTLRDGNRLP ADMVVVGIGI RPNTGLFEGQ LTLEKGGIKV NGWMQSSNSS VYAVGDVAAF
301: PVKLFGETRR LEHVDSARKS ARHAVTAIME PAKTSEFDYL PFFYSRVFTL SWQFYGDSVG EVVHYGDFSG STFGAYWVSK GQLVGSFLEG GTKEEYEAIA
401: KATKLKPDVE DLAELERQGL GFALAVSRKP PPSQPPEVSS SGLNLQKPMY AWHATAGVIV AASVAVFAYW YGRKRRRW

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.