Factsheet for TraesCS6B01G301300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G254000.1	Wheat	extracellular	88.51	98.74
TraesCS6A01G273400.1	Wheat	extracellular	88.14	98.32
EES05650	Sorghum	plasma membrane	77.4	86.34
Os02t0707100-01	Rice	plasma membrane	76.84	85.71
Zm00001d017787_P001	Maize	extracellular	76.84	85.36
GSMUA_Achr6P09110_001	Banana	extracellular	66.86	75.21
VIT_14s0066g01100.t01	Wine grape	plasma membrane, vacuole	66.1	73.43
CDX86468	Canola	extracellular	62.9	71.98
Solyc02g086710.2.1	Tomato	plastid	64.6	71.31
PGSC0003DMT400001279	Potato	plasma membrane	64.41	71.1
CDY44437	Canola	vacuole	62.9	70.32
KRH07189	Soybean	plasma membrane	63.28	70.29
KRG94085	Soybean	peroxisome	63.09	70.08
CDY49764	Canola	plasma membrane, vacuole	60.83	69.76
Bra025303.1-P	Field mustard	extracellular	63.28	68.99
AT3G27820.1	Thale cress	vacuole	62.9	68.44
Bra033028.1-P	Field mustard	plasma membrane, vacuole	61.39	66.53
TraesCS6B01G301200.1	Wheat	extracellular	61.77	66.0
CDX95814	Canola	cytosol	6.4	61.82
VIT_19s0014g05380.t01	Wine grape	extracellular	10.36	57.29
TraesCS4B01G010500.1	Wheat	golgi	43.5	53.1
TraesCS7B01G175300.1	Wheat	cytosol	42.56	50.0
TraesCS7B01G204400.1	Wheat	plastid	35.03	37.65

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF07992
PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF1	SUPFAM:SSF51905	SUPFAM:SSF55424
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G301300	EnsemblPlants:TraesCS6B01G301300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:539625237..539629177

Molecular Weight (calculated)

58150.0 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.022

Length

531 amino acids

Sequence
(BLAST)

001: MGRAFVYVVL GGGVAAGYAA LEFARRGGYS RGELCIISEE AMSKGGGKPG GAGELKTNRD DMLLFFACGT IITQFMPCDS IIERVFLLMI SFVSCQVAPY
101: ERPALSKGYL LPEDPSRLPK FHTCVGANDE LLTTKWYKEQ GIELVLGTRV ISADVRRKTL LTATGETISY KTLIIATGAR ALKLEEFGIS GSDAANICYL
201: RNLEDADKLV NAMSSCSGGN AVVIGGGYIG MECAAALVTN KIKVTMVFPE KHCMGRLFTE KIADYYESYY TLKGVTFTKG TVLTSFEKDS TGKVTSVILR
301: DGNHLPADMV VVGIGIRANT SLFEGQLLME KGGIKVNGQM QTSDSSVYAV GDVAAFPIKL FDGDIRRLEH VDSARRTARH AVAAILEPSK TRDVDYLPFF
401: YSRVFTLSWQ FYGDNVGEVI HYGDFTSNSP RFGAYWVSKG QITGAFLEGG NRDDYEALSM VVRRKTKVLD MPELERQGLA FAIQESKKDV PDSGVTLGEK
501: PTFVWYATAG VVAAVSISAF GYWYGRKRRR W

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.