Factsheet for Solyc02g086710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001279	Potato	plasma membrane	98.34	98.34
KRH07189	Soybean	plasma membrane	80.46	80.96
CDX86468	Canola	extracellular	77.55	80.39
KRG94085	Soybean	peroxisome	79.0	79.5
CDY44437	Canola	vacuole	77.75	78.74
AT3G27820.1	Thale cress	vacuole	79.0	77.87
Bra025303.1-P	Field mustard	extracellular	78.38	77.41
CDY49764	Canola	plasma membrane, vacuole	74.01	76.89
GSMUA_Achr6P09110_001	Banana	extracellular	74.01	75.42
Bra033028.1-P	Field mustard	plasma membrane, vacuole	74.84	73.47
Os02t0707100-01	Rice	plasma membrane	71.93	72.69
TraesCS6D01G254000.1	Wheat	extracellular	71.52	72.27
TraesCS6A01G273400.1	Wheat	extracellular	70.89	71.64
Zm00001d017787_P001	Maize	extracellular	71.1	71.55
CDX95814	Canola	cytosol	7.9	69.09
TraesCS6B01G301300.1	Wheat	extracellular	71.31	64.6
VIT_19s0014g05380.t01	Wine grape	extracellular	12.68	63.54
TraesCS6A01G273500.1	Wheat	mitochondrion, plasma membrane	62.16	60.9
HORVU6Hr1G069190.7	Barley	mitochondrion, plasma membrane	61.95	60.57
TraesCS6B01G301200.1	Wheat	extracellular	62.58	60.56
TraesCS6D01G253900.2	Wheat	extracellular, mitochondrion	62.58	58.45
Zm00001d017786_P001	Maize	extracellular, vacuole	60.91	57.0
Os02t0707000-00	Rice	plasma membrane	35.55	55.16
Solyc09g009390.2.1	Tomato	extracellular	47.19	52.42
KXG28119	Sorghum	cytosol	11.43	42.31
Solyc08g081530.2.1	Tomato	plastid	37.84	37.76
OQU91530	Sorghum	cytosol	5.41	26.53

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	UniProt:K4BBH8	PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411
PANTHER:PTHR43557	PANTHER:PTHR43557:SF5	SUPFAM:SSF51905	SUPFAM:SSF55424	EnsemblPlantsGene:Solyc02g086710.2	EnsemblPlants:Solyc02g086710.2.1
TMHMM:TMhelix	UniParc:UPI0002767B4F	SEG:seg	:	:	:

Description

Monodehydroascorbate reductase 4, peroxisomal [Source:Projected from Arabidopsis thaliana (AT3G27820) UniProtKB/Swiss-Prot;Acc:Q9LK94]

Coordinates

chr2:+:49352636..49358130

Molecular Weight (calculated)

52410.7 Da

IEP (calculated)

7.288

GRAVY (calculated)

-0.011

Length

481 amino acids

Sequence
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA HEFVKRGVSH GELCIISEEP VAPYERPALS KGYLLPEDPA RLPAFHCCVG SNEERLTPKW YKENGIELVL GTRVKSADVR
101: RKTLLTATGE TITYKILIVA TGARALKLEE FGVSGSDAES VCYLRDLADA NRLVNVMQSS GGGNAVVIGG GYIGMECAAS LVIGKINVTM VFPEAHCMAR
201: LFTPKIASFY EEFYRSKGVK FVKGTVLTSF DFDSNDKMTA VNLRDGTKLP ADMVIVGIGI RPNTSLFEGQ LTLEKGGIKV NGQMQSSNSS VYAVGDVATF
301: PVKIFGETRR LEHVDSARKS ARHAVAAIME PEKTTEFDYL PFFYSRVFTL SWQFYGDSTG DVVHFGDFLG NSFGAYWVNK GHVVGSFLEG GTKEEYEAIA
401: KITRLKPAIE DLSDLETQGL GFALTLSDKP EPSEAVVVSS SSGSTFVTEK PLHVWHATAG VILAASIAAF AYWYGRRRRR W

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.