Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28119 | Sorghum | cytosol | 46.94 | 35.38 |
| OQU85544 | Sorghum | extracellular | 34.69 | 6.92 |
| EES05650 | Sorghum | plasma membrane | 30.61 | 6.3 |
| CDX86468 | Canola | extracellular | 29.59 | 6.25 |
| CDY44437 | Canola | vacuole | 29.59 | 6.11 |
| CDY49764 | Canola | plasma membrane, vacuole | 28.57 | 6.05 |
| Bra025303.1-P | Field mustard | extracellular | 29.59 | 5.95 |
| KRG94085 | Soybean | peroxisome | 28.57 | 5.86 |
| KRH07189 | Soybean | plasma membrane | 28.57 | 5.86 |
| AT3G27820.1 | Thale cress | vacuole | 28.57 | 5.74 |
| Bra033028.1-P | Field mustard | plasma membrane, vacuole | 28.57 | 5.71 |
| PGSC0003DMT400001279 | Potato | plasma membrane | 26.53 | 5.41 |
| Solyc02g086710.2.1 | Tomato | plastid | 26.53 | 5.41 |
| EES15190 | Sorghum | golgi | 22.45 | 5.08 |
| KXG24413 | Sorghum | mitochondrion, plastid | 25.51 | 4.96 |
| KXG35115 | Sorghum | peroxisome | 20.41 | 4.6 |
| VIT_19s0014g05380.t01 | Wine grape | extracellular | 1.02 | 1.04 |
| CDX95814 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:OQU91530 | EnsemblPlantsGene:SORBI_3001G199566 | PANTHER:PTHR43557 | PANTHER:PTHR43557:SF1 | ProteinID:OQU91530 | ProteinID:OQU91530.1 |
| SEG:seg | UniParc:UPI000B8B9981 | UniProt:A0A1Z5S6H1 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:+:18068138..18069595
Molecular Weight (calculated)
10297.4 Da
IEP (calculated)
6.758
GRAVY (calculated)
-0.060
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MGGRPRMAAA VSEREGKDEG SCGGVQGRVE GACKSGGDAV AAGLRWAGGA RLPAFHTCVG ANDQLLTADW YKEHGMLRLM FGVLCVIYDL HIGSPYVD
001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW
Arabidopsis Description
MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.