CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017787_P001	Maize	extracellular	97.06	96.65
Os02t0707100-01	Rice	plasma membrane	88.24	88.24
TraesCS6A01G273400.1	Wheat	extracellular	86.55	86.55
TraesCS6D01G254000.1	Wheat	extracellular	86.34	86.34
TraesCS6B01G301300.1	Wheat	extracellular	86.34	77.4
GSMUA_Achr6P09110_001	Banana	extracellular	74.79	75.42
OQU85544	Sorghum	extracellular	71.43	69.25
KXG35115	Sorghum	peroxisome	49.58	54.25
EES15190	Sorghum	golgi	48.95	53.81
KXG28119	Sorghum	cytosol	12.82	46.92
KXG24413	Sorghum	mitochondrion, plastid	38.87	36.71
OQU91530	Sorghum	cytosol	6.3	30.61

Protein Annotations

MapMan:10.4.1.2	Gene3D:3.30.390.30	Gene3D:3.50.50.60	UniProt:C5Y0A7	EnsemblPlants:EES05650	ProteinID:EES05650
ProteinID:EES05650.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156	InterPro:IPR036188
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF1	EnsemblPlantsGene:SORBI_3004G266400
SUPFAM:SSF51905	SUPFAM:SSF55424	unigene:Sbi.4336	TMHMM:TMhelix	UniParc:UPI0001A85D81	RefSeq:XP_002452674.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:61087870..61092609

Molecular Weight (calculated)

51783.4 Da

IEP (calculated)

9.102

GRAVY (calculated)

-0.011

Length

476 amino acids

Sequence
(BLAST)

001: MGRAFVYVIL GGGVAAGYAV LEFARRGGYS RGELCIISEE AVAPYERPAL SKGYLLPEGA ARLPGFHTCV GANDELLTTK WYKEQGIELV LGTKVISADV
101: RRKTLLTGTG ETISYKTLII ATGARALKLQ EFGIQGSDAS NICYLRNIDD ADKLVSAMKS CPGGNAVVIG GGYIGMECAA ALVTNKIRVT MVFPEKHCMG
201: RLFTPKIAEF YENYYTSKGV TFVKGTVLTS FEKDTTGKVT AVILKDGRHL PADMVVVGIG IRANTSLFEG QLMMENGGIK VNGQLQTSDS SVYAVGDVAA
301: FPIKLFDGDI RRLEHVDSAR RTARHAVASI LEPSKNKDID YLPFFYSRVF TLSWQFYGDN VGEVVHFGDF TSSSPRFGAY WVNKGRIAGA FLEGGSREEY
401: EAISIAVRRK AMVTNMGELE KQGLALAIQE SQKEVPDSGL AIVGKPTYTW HATAGVVAAV SIAAIGYWYG RKRRRW

Best Arabidopsis Sequence Match ( AT3G27820.1 )
(BLAST)

001: MGRAFVYVIL GGGVAAGYAA LEFTRRGVSD GELCIISEEP VAPYERPALS KGFLLPEAPA RLPSFHTCVG ANDEKLTPKW YKDHGIELVL GTRVKSVDVR
101: RKTLLSSTGE TISYKFLIIA TGARALKLEE FGVEGSDAEN VCYLRDLADA NRLATVIQSS SNGNAVVIGG GYIGMECAAS LVINKINVTM VFPEAHCMAR
201: LFTPKIASLY EDYYRAKGVK FIKGTVLTSF EFDSNKKVTA VNLKDGSHLP ADLVVVGIGI RPNTSLFEGQ LTIEKGGIKV NSRMQSSDSS VYAIGDVATF
301: PVKLFGEMRR LEHVDSARKS ARHAVSAIMD PIKTGDFDYL PFFYSRVFAF SWQFYGDPTG DVVHFGEYED GKSFGAYWVK KGHLVGSFLE GGTKEEYETI
401: SKATQLKPAV TIDLEELERE GLGFAHTVVS QQKVPEVKDI PSAEMVKQSA SVVMIKKPLY VWHAATGVVV AASVAAFAFW YGRRRRRW

Arabidopsis Description

MDAR4MDAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178VES2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.