Factsheet for PGSC0003DMT400007000

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009390.2.1	Tomato	extracellular	99.08	99.08
VIT_08s0007g03610.t01	Wine grape	extracellular	84.53	84.33
KRH30834	Soybean	nucleus	81.52	81.52
KRH32676	Soybean	endoplasmic reticulum, extracellular, nucleus	81.52	81.52
GSMUA_Achr2P20300_001	Banana	extracellular	80.83	80.65
GSMUA_Achr1P17030_001	Banana	cytosol, mitochondrion, peroxisome	80.14	79.95
CDX73597	Canola	peroxisome	79.45	79.26
CDX78130	Canola	peroxisome	79.45	79.26
CDY13340	Canola	peroxisome	79.45	79.26
Bra006954.1-P	Field mustard	peroxisome	79.21	79.03
Os09t0567300-01	Rice	plasma membrane	78.98	78.62
KXG35115	Sorghum	peroxisome	78.29	77.93
Zm00001d005347_P001	Maize	peroxisome, plasma membrane	77.83	77.47
TraesCS4B01G010500.1	Wheat	golgi	77.6	77.24
TraesCS4D01G009200.1	Wheat	golgi	77.6	77.24
TraesCS4A01G303300.1	Wheat	golgi	77.37	77.01
EES15190	Sorghum	golgi	76.44	76.44
Zm00001d049954_P001	Maize	extracellular	76.44	76.44
Os08t0557600-01	Rice	plasma membrane	76.44	76.09
TraesCS7D01G277500.1	Wheat	peroxisome	75.75	75.4
TraesCS7A01G277600.1	Wheat	peroxisome	75.52	75.17
AT3G52880.2	Thale cress	extracellular, vacuole	79.68	74.03
TraesCS7B01G175300.1	Wheat	cytosol	75.52	72.35
PGSC0003DMT400001279	Potato	plasma membrane	51.96	46.78
PGSC0003DMT400032099	Potato	plastid	45.03	39.96

Protein Annotations

MapMan:10.4.1.2	EntrezGene:102586212	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005782
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020
GO:GO:0016491	GO:GO:0016656	GO:GO:0046686	GO:GO:0048046	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016156	InterPro:IPR036188	UniProt:M0ZSA3	PFAM:PF07992	EnsemblPlantsGene:PGSC0003DMG400002703	PGSC:PGSC0003DMG400002703
EnsemblPlants:PGSC0003DMT400007000	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43557	PANTHER:PTHR43557:SF5	SUPFAM:SSF51905
SUPFAM:SSF55424	UniParc:UPI000294D44A	RefSeq:XP_006341144.1	:	:	:

Description

Monodehydroascorbate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400002703]

Coordinates

chr9:-:3322259..3327483

Molecular Weight (calculated)

46996.0 Da

IEP (calculated)

5.385

GRAVY (calculated)

-0.106

Length

433 amino acids

Sequence
(BLAST)

001: MAEKSFKYVI VGGGVSAGYA AREFAKQGVN PGELAIISKE AVAPYERPAL SKAYLFPEGA ARLPGFHVCV GSGGERQLPE WYAEKGISLI LSTEIVKADL
101: ASKTLVSAAG ESFKYQTLVI ATGSTVLKLS DFGVQGADSK NIFYLREIDD ADQLVEALKA KKNGKAVIVG GGYIGLELSA VLRLNNIEVN MVYPEPWCMP
201: RLFTEGIAAF YEGYYQNKGV NIIKGTVAVG FDTHPNGEVK EVKLKDGRVL EADIVVVGVG AKPLTTLFKG QVEEEKGGIK TDAFFKTSVP DVYAVGDVAT
301: FPLKMYNEIR RVEHVDHSRK SAEQAVKAIF ASEQGKSVDE YDYLPYFYSR AFDLSWQFYG DNVGETVLFG DADPNSATHK FGQYWIKDGK IVGAFLESGS
401: PEENKAIAKV AKVQPPATLD QLAQEGISFA SKI

Best Arabidopsis Sequence Match ( AT3G52880.1 )
(BLAST)

001: MAEKSFKYII LGGGVSAGYA AKEFANQGVQ PGELAVISKE AVAPYERPAL SKGYLFPEGA ARLPGFHCCV GSGGEKLLPE SYKQKGIELI LSTEIVKADL
101: SAKSLVSATG DVFKYQTLII ATGSTVLRLT DFGVKGADSK NILYLREIDD ADKLVEAIKA KKGGKAVVVG GGYIGLELSA VLRINNLDVT MVFPEPWCMP
201: RLFTADIAAF YETYYTNKGV KIIKGTVASG FTAQPNGEVK EVQLKDGRTL EADIVIVGVG AKPLTSLFKG QVEEDKGGIK TDAFFKTSVP DVYAVGDVAT
301: FPLKMYGDVR RVEHVDHSRK SAEQAVKAIK AAEGGAAVEE YDYLPFFYSR SFDLSWQFYG DNVGDSVLFG DSNPSNPKPR FGAYWVQGGK VVGAFMEGGS
401: GDENKALAKV AKARPSAESL DELVKQGISF AAKI

Arabidopsis Description

ATMDAR1Monodehydroascorbate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4J849]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.